Input sequence

Protein name Sodium channel protein type 4 subunit alpha A
Organism Danio rerio Length 1829
Disorder content 20.8% ProS content 14.3%
IDEAL NA UniProt Q2XVR3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1829 1-12 13-17 18-68 69-452 453-540 541-813 814-823 824-848 849-953 954-1666 1667-1674 1675-1723 1724-1829 13-17 69-452 541-813 824-848 954-1666 1675-1723 1-12 18-68 453-540 814-823 849-953 1667-1674 1724-1829 1-12 18-35 45-68 461-487 500-540 821-823 849-905 917-924 930-936 1667-1674 1724-1730 1736-1752 1772-1783 1795-1806 1822-1829 1570-1719 1274-1294 1568-1719 1274-1294 1035-1260 153-273 1354-1563 616-793 822-1007 152-413 616-805 820-1007 1033-1260 1353-1563 1314-1432 578-663 993-1078 174-266 63-422 575-809 923-1269 1302-1572 35-43 669-681 709-721 794-821 900-916 936-957 1093-1108 1448-1470 414-452 121-143 189-211 216-238 243-265 349-371 391-413 576-598 613-635 642-664 700-722 783-805 998-1016 1037-1054 1069-1091 1118-1140 1239-1261 1320-1339 1349-1371 1378-1400 1451-1473 1541-1563 4dckA(3-152) 6e-49 61.33% 1byyA(1-21) 0.0005 90.48% 4dckA(1-152) 4e-44 60.53% 1byyA(1-21) 2e-05 90.48% PF00520(3-198) 5e-34 41.15% PF00520(2-124) 1e-19 37.8% PF00520(2-198) 4e-15 33.48% PF00520(1-186) 1e-12 36.36% PF06512(3-219) 1e-14 34.7% PF00520 3.5e-68 237.1% PF00520 1.1e-60 212.2% PF06512 3.2e-70 243.9% PF00520 4.1e-72 250.2% PF00520 1.7e-59 208.2% 1orsC(1-117) 7e-21 16.53% 1orsC(2-87) 3e-12 14.94% 1orsC(2-85) 2e-09 12.79% 2e9xC1(5-103) 3e-12 10.48% f.14.1 1.4e-27 95.8% f.14.1 7.3e-29 100.2% f.14.1 2e-37 130.0% f.14.1 6.1e-37 128.3%

Sequence

MARLLPPTGTSVFRRFTPESLVEIERLIQEKSTREELEGAEEEPQAPSSDLEAGKCLPMI
YGDPPGDLLNTPLEDIDPFYKTQKTFIVISKGNTIFRFSSEPAMFCISPFSIVRRGAIKI
LIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGPFT
FLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMIDVMILTIFALAVFALIGLQLFMGNLRQKCIRWPILNSTIFDVYNSNMVNDTTLNVT
DTFDFKAYINNEENQYFLEGSLDALLCGNSSDAGRCPEGYTCMKAGRNPNYGYTSYDNFG
WAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYDEQ
NEATLAEARDKEEEFQRLLEQLKNQETGSKASLASQKTQSRGSNRTGSLHDLADEDVIKD
CNGRIVPRLIVNRVSSNKELSAEEDQKSLSSKHSMQYLDQPKLSKRTASALSVLTATMEG
LEDAQRPCPPGWYKFADMFLKWDCCAPWILFKKWVHFVVMDPFVDLGITICIVLNTLFMA
MEHYPMSPHFEHVLSVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVTLSLVE
LGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKDCVCKISEDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGAS
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRITRGIDWV
KALVASMVQRILGKKPDNTKEEGEGDIELYALNHLDEGKMADGLTNCLSPTLTVPIARCE
SDVEEDEDSESSDEEDAKATLNDGDSSVCSTVDYQPPEPEPEPEEVEEEEPEPEEPEACF
TEGCIRRCACLSVDITEGWGKKWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAFEDIN
IERRRVIKTILEYADKVFTYIFIVEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLTA
NLMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIF
SIMGVNLFAGKFYHCINTTTEERIPMDVVNNKSDCMALMYTNEVRWVNVKVNYDNVGLGY
LSLLQIATFKGWMDIMYAAVDSREVDEQPSYEINLYMYLYFVIFIIFGSFFTLNLFIGVI
IDNFNQQKSKFGGKDIFMTEEQKKYYNAMKKLGAKKRPKPIPRPSNIIQGLVFDFISKQF
FDIFIMVLICLNMVTMMIETDDQSAEKEYVLYQINLVFIVVFTSECVLKLFALRQYFFTI
GWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFA
LMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFETFGGSIICLFEITT
SAGWDGLLLPILNSGPPDCDPDFENPGTDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYI
AIILENFNNAQEESGDPLCEDDFDMFDETWEKFDVDATQFIEYDRLFDFVDALQEPLRIA
KPNRLKLISMDIPIVNGDKIHSQDILLAVTREVLGDTIEMDAMKESIEAKFIMNNPTSAS
FEPIITTLRRKEEERAAIAVQRIYRRHLLKRAIRYACFMRRSKRKVRNPNDNEPPETEGL
IARKMNTLYGSNPELAMALELETRPMRPNSQPPKPSQVTQTRASVTFPRPQGQLILPVEL
TSEVILRSAPITHSLNSSENATTIKESIV

Region:1-1829
Length:1829aa
Label:Full sequence
Reset:click