Input sequence

Protein name Collagen alpha-1(XXVIII) chain
Organism Mus musculus Length 1141
Disorder content 66.0% ProS content 57.6%
IDEAL NA UniProt Q2UY11

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1141 1-34 35-215 216-845 846-999 1000-1088 1089-1141 35-215 846-999 1089-1141 1-34 216-845 1000-1088 1-34 216-230 238-667 683-698 704-713 723-802 809-827 832-845 1000-1004 1020-1025 1030-1046 1051-1056 1084-1088 1088-1138 797-972 9-227 796-981 47-243 1084-1139 709-770 590-636 798-934 1087-1138 48-227 243-300 301-360 435-492 498-556 557-615 650-707 710-768 798-980 1087-1139 795-981 47-227 1084-1138 501-770 41-242 792-987 1084-1138 245-260 306-363 375-422 438-479 537-560 566-582 640-661 667-684 696-707 771-789 911-924 1kthA(5-55) 7e-12 47.06% 1pt6A(2-177) 9e-09 28.42% 4nehA(107-310) 0.0004 22.12% 1n3yA(2-187) 4e-31 23.68% 1lfaA(3-183) 6e-14 18.5% 2kcrA(3-58) 2e-17 35.71% 2pneA(2-74) 8e-07 36.99% 2pneA(1-45) 0.0002 38.3% PF00092(1-137) 3e-10 31.16% PF00014(1-52) 4e-08 40.38% PF00092 9.9e-22 82.8% PF01391 1.3e-05 23.5% PF01391 9.5e-10 43.0% PF01391 0.0002 1.5% PF01391 1.6e-05 21.9% PF01391 5.5e-05 12.0% PF01391 0.0002 1.5% PF01391 3.5e-05 15.6% PF00092 2.3e-39 141.3% PF00014 1.2e-19 75.9% 1ao3A(3-187) 2e-24 19.29% 1cqpA(3-175) 1e-15 20.65% 1aalA(1-55) 2e-15 25.45% 1af0A1(2-216) 9e-05 9.93% c.62.1 8.3e-32 107.3% c.62.1 7.6e-45 146.5% g.8.1 3.9e-18 57.6%

Sequence

MRRRDVAFCLLLLPAFMTQAVYGQRKKGPKPNTLARKNDFQDAICFIDVVFILDSSESSK
IVLFDNQKDFVDSLSEKIFQLTPGRSLKYDIKLAALQFSSSVQIDPPLSSWKDLRTFKQR
VKSLNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKSPDVQSISEDARI
LGISFITVGLSTVVNEAKLRLISGDPSNEPVLLLSDPTLVDRIQERLGVLFERKCEHKIC
ECEKGEPGDPGPPGTHGNPGIKGERGPKGNPGDAQKGETGERGPVGIPGYKGDKGERGEC
GKPGMKGDKGPEGPYGPKGPRGIQGIGGPPGDPGPKGFQGNKGEPGPPGPYGPPGAPGIG
QQGVKGERGQEGRMGAPGPIGIGEPGQPGPRGPEGAPGERGLPGEGFPGPKGEKGSEGPI
GPQGLQGLSIKGDKGDLGPVGPQGPAGIPGIGSQGEQGIQGPSGPPGPQGPPGQGSPGPK
GEVGQMGPTGPRGPMGIGVQGPKGEPGTVGLPGQPGVPGEDGASGKKGEAGLPGTRGPEG
MPGKGQPGPKGDEGKKGSKGNQGQRGFPGPEGPKGEPGVMGPFGMPGASIPGPSGPKGDR
GGPGMPGLKGEPGLPVRGPKGAQGPRGPVGAPGLKGDGYPGVAGPRGLPGPPGPMGLRGV
GDTGAKGEPGVRGPPGPSGPRGIGTQGPKGDTGQKGLPGPPGPPGYGSQGIKGEQGPQGF
PGSKGTVGLGLPGQKGEHGDRGDVGRKGEKGETGEPGSPGKQGLQGPKGDLGLTKEEIIK
LIIEICGCGPKCKETPLELVFVIDSSESVGPENFQIIQSFVKTLADRVALDLGTARIGII
NYSHKVEKVASLKQFSSKDDFKLVVDNMQYLGEGTYTATALQAANDMFKEARPGVKKVAL
VITDGQTDSRDKKKLADVVKDANDSNVEIFVIGVVKKDDPNFEIFHKEMNLIATDAEHVY
QFDDFFTLQDTLKQKLSKKICEDFDSYLIQVFGSPSFQPEFGVSEREVSVSTPKPAKEMS
KSFNVSRGQNEETESYVLTEAGILAIPTPPEATNTLEPLLSSREGVETRTPNPNLLQSEK
SLYKDPRCEEALKPGECGDYVVRWYYDKQVNSCARFWFSGCNGSGNRFHSEKECRETCIK
Q

Region:1-1141
Length:1141aa
Label:Full sequence
Reset:click