Input sequence

Protein name Collagen alpha-1(XXVIII) chain
Organism Homo sapiens Length 1125
Disorder content 65.4% ProS content 60.3%
IDEAL NA UniProt Q2UY09

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1125 1-34 35-211 212-847 848-1002 1003-1068 1069-1125 35-211 848-1002 1069-1125 1-34 212-847 1003-1068 1-34 212-231 238-588 593-706 712-720 728-802 810-822 833-847 1009-1028 1042-1068 797-977 1079-1122 47-162 796-981 47-227 1067-1123 709-772 261-339 798-934 1071-1122 48-227 243-300 301-360 366-423 498-556 557-615 647-704 707-765 798-980 1071-1123 791-987 47-228 1072-1122 41-242 792-987 1068-1122 232-260 306-322 340-360 381-422 437-478 518-535 537-560 566-582 591-613 640-661 667-684 696-707 773-785 1045-1056 1pt6A(2-191) 1e-14 28.72% 1kthA(12-55) 9e-12 50.0% 1lfaA(3-113) 0.0002 31.15% 1n3yA(2-187) 2e-37 24.74% 1lfaA(3-175) 2e-13 18.48% 2kcrA(2-58) 1e-18 36.84% 2pneA(2-76) 8e-07 36.0% 2pneA(1-75) 0.0007 36.71% PF00092(1-137) 3e-11 30.43% PF00014(1-52) 4e-09 42.31% PF00092 1.7e-21 82.0% PF01391 4.3e-05 14.1% PF01391 2e-10 45.2% PF01391 0.00024 0.1% PF01391 1.1e-05 24.9% PF01391 1.8e-05 21.1% PF01391 0.00016 3.3% PF01391 3.1e-05 16.5% PF00092 2e-43 154.9% PF00014 3.8e-19 74.2% 1auqA(10-204) 6e-29 16.34% 1ao3A(5-180) 1e-15 18.13% 1aalA(5-55) 1e-15 29.41% c.62.1 8e-33 110.8% c.62.1 3e-47 154.4% g.8.1 2e-18 58.5%

Sequence

MWNRYFVFYLLLLSAFTSQTVSGQRKKGPKSNLLARKSDVQGSICFIDIVFIVDSSESSK
IALFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQK
VKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVVLLMTDGIDHPKNPDVQSISEDARI
SGISFITIALSTVVNEAKLRLISGDSSSEPTLLLSDPTLVDKIQDRLDILFEKKCERKIC
ECEKGDPGDPGPPGTHGNPGIKGERGPKGNPGNAQKGEAGERGPGGIPGYKGDKGERGEC
GKPGIKGDKGSPGPYGPKGPRGIQGITGPPGDPGPKGFQGNKGEPGPPGPYGSPGAPGIG
QQGIKGERGQEGRPGAPGPIGVGEPGQPGPRGPEGVPGERGLPGEGFPGPKGEKGSEGPT
GPQGLQGLSIKGEKGDIGPVGPQGPMGIPGIGSQGEQGIQGPIGPPGPQGPAGQGLPGSK
GEVGQMGPTGPRGPVGIGVQGPKGEPGSIGLPGQPGVPGEDGAAGKKGEAGLPGARGPEG
PPGKGQPGPKGDEGKKGSKGNQGQRGLPGPEGPKGEPGIMGPFGMPGTSIPGPPGPKGDR
GGPGIPGFKGEPGLSIRGPKGVQGPRGPVGAPGLKGDGYPGVPGPRGLPGPPGPMGLRGV
GDTGAKGEPGVRGPPGPSGPRGVGTQGPKGDTGQKGLPGPPGPPGYGSQGIKGEQGPQGF
PGPKGTMGHGLPGQKGEHGERGDVGKKGDKGEIGEPGSPGKQGLQGPKGDLGLTKEEIIK
LITEICGCGPKCKETPLELVFVIDSSESVGPENFQIIKNFVKTMADRVALDLATARIGII
NYSHKVEKVANLKQFSSKDDFKLAVDNMQYLGEGTYTATALQAANDMFEDARPGVKKVAL
VITDGQTDSRDKEKLTEVVKNASDTNVEIFVIGVVKKNDPNFEIFHKEMNLIATDPEHVY
QFDDFFTLQDTLKQKLFQKICEDFDSYLVQIFGSSSPQPGFGMSGEELSESTPEPQKEIS
ESLSVTRDQDEDDKAPEPTWADDLPATTSSEATTTPRPLLSTPVDGAEDPRCLEALKPGN
CGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECQETCIQG

Region:1-1125
Length:1125aa
Label:Full sequence
Reset:click