Input sequence

Protein name Low-density lipoprotein receptor
Organism Sus scrofa Length 811
Disorder content 1.0% ProS content 0.6%
IDEAL NA UniProt Q28832

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 811 1-20 21-25 26-157 158-160 161-164 165-811 1-20 26-157 165-811 21-25 158-160 21-25 34-685 1-36 34-685 1-32 500-540 116-148 76-112 36-73 168-202 206-241 1-32 35-73 76-112 115-153 166-202 205-241 245-284 289-323 325-363 410-455 457-498 500-542 544-587 588-628 371-611 574-685 116-155 168-218 77-127 35-86 206-257 1-43 249-289 288-328 325-366 1-33 33-73 76-112 112-156 159-205 204-241 244-287 369-632 632-684 752-763 741-763 1n7dA(1-639) 0.0 85.58% 1ldlA(11-46) 5e-14 83.33% 1n7dA(1-639) 9e-85 82.67% 2kriB(7-38) 5e-05 46.88% PF00058(1-40) 3e-06 46.34% PF00057(2-34) 9e-06 63.64% PF00057(1-37) 6e-05 54.05% PF00057(2-37) 7e-05 57.89% PF00057(3-37) 0.0001 60.0% PF00057(2-37) 0.0002 61.11% PF00057 5.7e-10 43.7% PF00057 2.4e-16 64.9% PF00057 1.1e-15 62.8% PF00057 5.6e-21 80.3% PF00057 8.5e-19 73.0% PF00057 5.6e-17 67.0% PF00057 3.1e-15 61.2% PF00008 3.4e-07 34.5% PF07645 2.1e-11 48.5% PF00058 8e-16 63.2% PF00058 1.3e-15 62.5% PF00058 1.5e-16 65.6% PF00058 2.4e-14 58.3% PF00058 2.2e-09 41.8% 1npeA(3-243) 7e-82 27.42% 1u7kA(9-124) 7e-26 19.35% 1n7dA7(2-41) 2e-09 90.0% 1n7dA7(3-50) 7e-08 37.25% 1n7dA7(2-50) 1e-07 41.18% 1n7dA7(1-48) 7e-07 34.62% 1n7dA7(2-49) 7e-07 40.38% 1n7dA7(8-50) 7e-07 41.86% 1n7dA7(4-44) 7e-05 36.59% 1adxA(1-40) 2e-06 36.59% 1n7dA3(1-42) 9e-05 85.71% g.12.1 1.5e-07 26.5% g.12.1 1.3e-11 43.3% g.12.1 6.9e-11 36.8% g.12.1 2.6e-12 44.7% g.12.1 6e-11 40.9% g.12.1 2.5e-10 35.6% g.12.1 2.9e-09 35.4% b.68.5 4.6e-80 263.3% g.3.11 4.4e-10 30.3%

Sequence

FQCQDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDG
QQDCENGSDEEGCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPA
SFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGEC
IHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDMSDEQG
CVNATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHIC
NDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLT
KACKAIGTIAYLFFTNRHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQR
KIYSTQIDRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRK
TLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLD
LSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDIINEAIF
SANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINP
RSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAVGPKHTASSELTTAESVT
MSQHALGDVAGRGVTEKPQSVGALYIVLPIALLILLFFGTFLLWKNWRLKSINSINFDNP
VYQKTTEDEVHICRSQDGYTYPSRQMVSLED

Region:1-811
Length:811aa
Label:Full sequence
Reset:click