Input sequence

Protein name Cyclic nucleotide-gated cation channel beta-1
Organism Bos taurus Length 1394
Disorder content 59.6% ProS content 17.4%
IDEAL NA UniProt Q28181

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1394 1-342 343-420 421-752 753-1208 1209-1365 1366-1394 343-420 753-1208 1366-1394 1-342 421-752 1209-1365 1-17 99-117 130-135 166-185 254-294 307-312 468-475 578-593 612-618 648-653 674-706 739-752 1209-1214 1220-1226 1235-1256 1344-1349 1358-1365 1002-1185 876-1124 1092-1185 1094-1180 807-993 1094-1185 1016-1185 874-997 764-997 1001-1200 10-55 196-208 217-239 355-463 493-508 529-554 709-732 806-820 857-867 1188-1203 1224-1269 1281-1332 1363-1394 343-420 1366-1394 766-788 801-823 4d7sA(2-181) 3e-26 32.61% 16vpA(53-301) 8e-31 2.81% 4chvA(245-330) 3e-21 27.66% PF00027(1-86) 3e-05 35.96% PF00520 1e-10 46.2% PF00027 1.7e-16 65.4% 1q3eA(16-177) 3e-28 32.94% 1p7bA2(3-114) 1e-15 14.4% f.14.1 2.9e-18 63.3% b.82.3 6.8e-47 163.3%

Sequence

MLGWVQRVLPQPPGTPQKTKQEEEGTEPEPELEPKPETAPEETELEEVSLPPEEPCVGKE
VAAVTLGPQGTQETALTPPTSLQAQVSVAPEAHSSPRGWVLTWLRKGVEKVVPQPAHSSR
PSQNIAAGLESPDQQAGAQILGQCGTGGSDEPSEPSRAEDPGPGPWLLRWFEQNLEKMLP
QPPKISEGWRDEPTDAALGPEPPGPALEIKPMLQAQESPSLPAPGPPEPEEEPIPEPQPT
IQASSLPPPQDSARLMAWILHRLEMALPQPVIRGKGGEQESDAPVTCDVQTISILPGEQE
ESHLILEEVDPHWEEDEHQEGSTSTSPRTSEAAPADEEKGKVVEQTPRELPRIQEEKEDE
EEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEGGEKEDEE
GREKEEEEGRGKEEEEGGEKEEEEGRGKEEVEGREEEEDEEEEQDHSVLLDSYLVPQSEE
DRSEESETQDQSEVGGAQAQGEVGGAQALSEESETQDQSEVGGAQDQSEVGGAQAQGEVG
GAQEQDGVGGAQDQSTSHQELQEEALADSSGVPATEEHPELQVEDADADSRPLIAEENPP
SPVQLPLSPAKSDTLAVPGSATGSLRKRLPSQDDEAEELKMLSPAASPVVAWSDPTSPQG
TDDQDRATSTASQNSAIINDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKA
PEPAPEVKPAEAGQVEEEHYCEMLCCKFKRRPWKKYQFPQSIDPLTNLMYILWLFFVVLA
WNWNCWLIPVRWAFPYQTPDNIHLWLLMDYLCDLIYLLDITVFQMRLQFVRGGDIITDKK
EMRNNYVKSQRFKMDMLCLLPLDLLYLKFGVNPLLRLPRCLKYMAFFEFNNRLESILSKA
YVYRVIRTTAYLLYSLHLNSCLYYWASAYEGLGSTHWVYDGVGNSYIRCYYWAVKTLITI
GGLPDPRTLFEIVFQGLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNF
YKIPRSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYSIVSKVALFQGC
DRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGS
VFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRN
NNKPKEKSVLILPPRAGTPKLFNAALAAAGKMGAKGGRGGRLALLRARLKELAALEAAAR
QQQLLEQAKSSEDAAVGEEGSASPEQPPRPEPPAPEAPAPEPTAPEPLAPEAPAPEAPAP
SSPPPASQERPEGDKDAARPEEHPVRIHVTLGPDPSEQILLVEVPEKQEEKEKKEEETEE
KEEGEEARKEKEEE

Region:1-1394
Length:1394aa
Label:Full sequence
Reset:click