Input sequence

Protein name Sodium channel protein type 4 subunit alpha B
Organism Danio rerio Length 1784
Disorder content 17.0% ProS content 12.3%
IDEAL NA UniProt Q20JQ7

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1784 1-10 11-17 18-20 21-48 49-63 64-463 464-528 529-797 798-806 807-843 844-928 929-1263 1264-1267 1268-1639 1640-1657 1658-1690 1691-1784 11-17 21-48 64-463 529-797 807-843 929-1263 1268-1639 1658-1690 1-10 18-20 49-63 464-528 798-806 844-928 1264-1267 1640-1657 1691-1784 1-10 18-20 50-63 464-489 499-522 844-881 895-916 1264-1267 1640-1657 1691-1704 1711-1727 1743-1763 1776-1784 1544-1696 1252-1271 1544-1696 1252-1271 1010-1199 158-279 604-761 1331-1539 350-421 809-982 158-421 602-791 804-982 1008-1237 1330-1539 1291-1409 564-669 968-1053 180-272 83-430 568-795 820-1246 1273-1567 26-41 422-449 464-473 695-707 769-778 780-795 873-892 916-928 1068-1083 1213-1228 1425-1447 21-48 422-463 127-149 194-216 223-245 249-271 357-379 399-421 562-584 599-621 690-712 732-749 769-791 972-991 1012-1034 1044-1066 1089-1120 1216-1238 1300-1317 1327-1345 1358-1380 1428-1450 1515-1537 4dckA(1-153) 1e-54 64.05% 1byyA(2-21) 0.0003 100.0% 4dckA(1-153) 1e-48 64.05% 1byyA(2-21) 1e-05 100.0% PF00520(3-170) 1e-27 41.05% PF00520(1-124) 2e-20 39.06% PF00520(3-169) 2e-15 35.93% PF00520(2-198) 5e-14 33.64% PF00520(128-198) 1e-11 44.44% PF06512(5-219) 5e-15 30.09% PF00520 2.4e-70 244.3% PF00520 2.7e-59 207.6% PF06512 6.8e-53 186.3% PF00520 1.6e-70 244.9% PF00520 1.1e-60 212.2% 1orsC(1-117) 1e-21 17.36% 1orsC(2-108) 8e-15 16.67% 1orsC(2-85) 9e-11 11.63% 2e9xC1(5-103) 8e-13 10.48% f.14.1 1.1e-28 99.6% f.14.1 2.6e-27 94.8% f.14.1 2.8e-41 143.4% f.14.1 1.6e-35 123.4%

Sequence

MARLLPPTGTDVFRPLTLESLAEIDRRMAEEAAEQERMKEQNVKVAEEDLPKPTSDLEAG
KVLPFIYGDPPPNLLNVPIEELDPYYKAQKTFIVIDKKNTIYRFNTEPACYCLSPFNPVR
RAAIRILIHSLFSLVIMLTILTNCVFMAMSDPPGWSKILEYVFTGIYTFEAMVKVLSRGF
CIGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVLWPPVGWYSDNLTVLSNYTD
INGNGTANSTFDYQKYINSEENYYYVPGQMDPLVCGNSSDAGLCPEGYICLKAGRNPNYG
YTSYDNFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAV
VAMAYAEQNEATAAEAKEKEEEYAKIMEQLKKQAEQKNGMVNGSKTSLSSKKKGDNDQMQ
SDYDGIALKPLSKSNGSKGNINYLEVPDSQIRKPSVVSAVESALDAQEDIERPCPPGWYK
FADIFLKWDCCIPWVKFKRIVYLFVMDPFVDLGITLCIVLNTVFMAMEHYPMSVHVEEVL
AIGNLVFTGIFAAEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRS
FRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYTDSV
CKISSDCELPRWHMADFFHAFLIIFRVLCGEWIETMWDCMEVAGQGMCIIVFMMVMVIGN
LVVLNLFLALLLSSFSGDNLSASDDDGENNLQIAISRITRGIDWIKAFVNKHVRQCLNLK
PKEEGAKVNGEGDAKMNAIMNSSSSMVKVPIANGESDDDDGNGSSEDEDDEGRDINMKKK
NGDESSTCSTVDKPPEVEDLVEEEEEDLTSPEDCYTENCIRRCPCLDLDVSQGKGKAWWN
FRKTCFAIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVVE
MLLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRA
LSRFEGMRVVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEEVF
DHNVVNNKTDCYELMEFHPEVRWMNGKINFDNVGMGYLALLQVATFKGWMDIMYSAVDSR
AIESQPVYEANLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQK
KYYNAMKKLGSKKPQKPIPRPTNCCQGLVFDFVTQQFFDIFIMVMICLNMVTMMVETDDQ
SAEIEEILFYINFAFIILFTGECVLKITALRYHYFSIGWNIFDFVVVILSILGIGLADLI
EKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFS
IFGMSNFAYVKKEVGIDDMMNFETFGNSIICMFMITTSAGWDGLLAPILNSPPDCDPDVD
NPGSTTRGNCGNAAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFE
MFYETWEKFDPTASQFIDYNRLSEFCDTLKDPLRIPKPNTLKLITMDIPMVTGDKIHCLD
LLLALTGEVLGGSDQMDGMKATMEEKFMANNPSKASYEPITSTLKRKQEEVAASTIQRAY
RSHILKRCVKQASYMYRDKTGSKKPTGEAPEKVGMIAENMRSLYGDQAVEDDHPVGCSFS
QHGKTQFGAKRPPVKVQSDVVLHSAPFPVPESSTAADNLRESIV

Region:1-1784
Length:1784aa
Label:Full sequence
Reset:click