Input sequence

Protein name Leucine-rich repeat protein SHOC-2
Organism Danio rerio Length 561
Disorder content 7.5% ProS content 1.8%
IDEAL NA UniProt Q1L8Y7

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 561 1-39 40-558 559-561 40-558 1-39 559-561 6-12 559-561 339-490 80-236 220-414 84-541 80-483 433-545 36-350 314-532 20-39 244-255 287-297 305-317 495-509 4psjA(89-245) 2e-24 41.4% 4pq8A(64-224) 1e-17 38.27% 3rfsA(30-214) 5e-09 30.46% 4mnaA(52-476) 2e-60 26.11% 1o6sA2(20-380) 5e-21 24.5% 1fo1A1(1-114) 0.0007 15.65% c.10.2 7.5e-62 196.7% c.10.2 1.4e-45 148.2%

Sequence

MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPE
VGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLP
YGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV

Region:1-561
Length:561aa
Label:Full sequence
Reset:click