Input sequence

Protein name Sodium channel protein type 5 subunit alpha
Organism Homo sapiens Length 2016
Disorder content 25.3% ProS content 16.6%
IDEAL NA UniProt Q14524

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2016 1-4 5-27 28-55 56-451 452-650 651-945 946-954 955-987 988-1164 1165-1923 1924-2016 5-27 56-451 651-945 955-987 1165-1923 1-4 28-55 452-650 946-954 988-1164 1924-2016 1-4 28-33 42-55 452-463 476-504 520-575 583-605 615-631 645-650 1002-1060 1070-1096 1137-1149 1161-1164 1924-1932 1939-1960 1974-1990 2000-2016 1776-1928 1483-1503 1776-1928 1483-1503 160-179 1243-1431 160-412 1563-1771 751-926 495-668 1129-1215 159-412 751-938 951-1215 1241-1469 1562-1771 1523-1610 713-799 1201-1287 173-273 767-836 1576-1687 118-421 684-968 1089-1478 1515-1799 474-484 804-816 844-856 927-944 1007-1026 1029-1044 1053-1064 1070-1080 1096-1113 1301-1316 1445-1460 1625-1644 1957-1979 413-451 127-149 193-215 222-244 254-276 391-413 714-736 749-771 781-798 839-861 876-895 916-938 1205-1224 1245-1262 1277-1299 1326-1348 1448-1470 1530-1547 1557-1577 1590-1612 1660-1682 1747-1769 4dckA(1-153) 3e-82 100.0% 1byyA(1-21) 8e-05 100.0% 4dckA(1-153) 3e-58 100.0% 1byyA(1-21) 5e-06 100.0% 1qg9A(2-21) 8e-05 90.0% PF00520(3-170) 9e-28 40.31% PF00520(2-198) 3e-25 29.73% PF00520(2-198) 1e-15 34.09% PF00520(1-186) 6e-13 38.5% PF11933(39-219) 2e-22 40.54% PF06512(133-219) 7e-13 42.05% PF00520 7e-74 256.0% PF00520 2e-58 204.7% PF06512 2.9e-135 459.9% PF00520 8.5e-71 245.8% PF00520 8.8e-60 209.2% 1orsC(1-89) 2e-18 11.24% 1orsC(2-88) 1e-13 11.36% 1orsC(2-86) 4e-11 12.64% 2e9xC1(1-103) 4e-14 12.39% 2e9xC1(3-83) 0.0002 12.35% 2e9xC1(1-105) 0.0003 12.93% f.14.1 6.7e-30 103.8% f.14.1 8.8e-29 99.9% f.14.1 4e-42 146.4% f.14.1 4.1e-35 122.0%

Sequence

MANFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSTTLQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPQELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPI
RRAAVKILVHSLFNMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIIMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNGTNGSVEADGLV
WESLDLYLSDPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVNSHERRSKRRK
RMSSGTEECGEDRLPKSDSEDGPRAMNHLSLTRGLSRTSMKPRSSRGSIFTFRRRDLGSE
ADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQPSPGTSAPGHALHGKKNSTVDCNGV
VSLLGAGDPEATSPGSHLLRPVMLEHPPDTTTPSEEPGGPQMLTSQAPCVDGFEEPGARQ
RALSAVSVLTSALEELEESRHKCPPCWNRLAQRYLIWECCPLWMSIKQGVKLVVMDPFTD
LTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRDSDSGLLPRWHMMDFFHAFLIIFRILCGEWI
ETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDREMNNLQ
LALARIQRGLRFVKRTTWDFCCGLLRQRPQKPAALAAQGQLPSCIATPYSPPPPETEKVP
PTRKETRFEEGEQPGQGTPGDPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQ
PVSGGPEAPPDSRTWSQVSATASSEAEASASQADWRQQWKAEPQAPGCGETPEDSCSEGS
TADMTNTAELLEQIPDLGQDVKDPEDCFTEGCVRRCPCCAVDTTQAPGKVWWRLRKTCYH
IVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWVA
YGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNN
KSQCESLNLTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQW
EYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKK
LGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKINIL
AKINLLFVAIFTGECIVKLAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPT
LFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFA
YVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPTLPNSNGSRG
DCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWEK
FDPEATQFIEYSVLSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFTKR
VLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSAMVIQRAFRRHLLQRS
LKHASFLFRQQAGSGLSEEDAPEREGLIAYVMSENFSRPLGPPSSSSISSTSFPPSYDSV
TRATSDNLQVRGSDYSHSEDLADFPPSPDRDRESIV

Region:1-2016
Length:2016aa
Label:Full sequence
Reset:click