Input sequence

Protein name Nuclear cap-binding protein subunit 1
Organism Oryza sativa subsp.japonica Length 867
Disorder content 8.7% ProS content 4.4%
IDEAL NA UniProt Q10LJ0

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 867 1-139 140-145 146-261 262-277 278-684 685-693 694-750 751-795 796-862 863-867 1-139 146-261 278-684 694-750 796-862 262-277 685-693 751-795 863-867 262-266 274-277 686-693 780-795 863-867 7-638 6-643 492-755 311-467 9-228 6-265 305-477 1-294 289-478 479-853 659-675 712-723 643-684 694-721 1h2tC(5-609) 1e-78 28.75% 1h2tC(4-614) 6e-149 28.26% PF09090(6-228) 1e-37 39.93% PF09088(8-177) 5e-34 40.12% PF02854 1.4e-20 79.0% 1h2tC1(4-249) 5e-66 27.31% 1h2tC2(17-189) 1e-24 38.86% a.118.1 7.9e-86 273.4% a.118.1 7e-67 229.0% a.118.1 5.4e-79 266.3%

Sequence

MSAGWRTLLLRIGDRCPEYGGSADHKEHIETCYGVLCREYEHSKDAMFEFLLQCADQLPH
KIPFFGVLIGLINLENEDFSKGIVDTTHANLQDALHNENRDRIRILLRFLCGLMCSKVVL
PNSIIETFEALLSSAATILDEETGNPSWQPRADFYVYCILASLPWGGSELFEQVPDEFER
VLVGIQSYISIRRHFDDIAFSVFETDEGNSPNKKDFIEDLWERIQVLSRNGWKVKSVPKP
HLSFEAQLVAGVSHRFSPISCPPPTISQSSSEIVKGQEKHEADLKYPQRLRRLHIFPTNK
AENMQPVDRFVVEECILDVLLFFNGCRKECAFYLVSLPVPFRYEYLMAETIFSQLLLLPN
PPFRPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISNMDMECRTRLILWFSHHLSNF
QFIWPWQEWAYVKDLPKWAPQRVFVQEVLEREIRLSYFDKIKQSIEDAVELEELLPPKAG
PNFRYHSDEGKESTDGHRLSKELVAMVRGRKTQGDIISWVDEKIIPVNGAKFALDVVSQT
LLDIGSKSFTHLITVLERYGQIISKLCPNEEMQLLLMDEVSAYWKNSTQMIAIAIDRMMG
YRLLSNLAIVKWVFSPANVDQFHVSDRPWEILRNAVSKTYNRIFDLRKEIQTLRKGLQAA
KEASEKAARELEEAKSIIEIVDGQPVPSENPGRLRRLQARADKAKEGEVTTEESLEAKEA
LLARGLEESKELLRLLFKSFVEVLTERLPPISADGDVPNLRAGDPNVNSSARDPEATTME
IDNENGGDNDSQLNGQNKKISHNVGELEQWCLCTLGYLKSFSRQYATEIWSHIAMLDQEI
FVGNIHPLIRKAAFSGLCRPTSEGSHL

Region:1-867
Length:867aa
Label:Full sequence
Reset:click