Input sequence

Protein name DNA-directed RNA polymerase II subunit RPB2
Organism Caenorhabditis elegans Length 1193
Disorder content 6.0% ProS content 4.8%
IDEAL NA UniProt Q10578

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1193 1-23 24-79 80-83 84-235 236-254 255-331 332-338 339-881 882-898 899-1185 1186-1193 24-79 84-235 255-331 339-881 899-1185 1-23 80-83 236-254 882-898 1186-1193 1-23 80-83 236-254 894-898 1186-1191 30-1180 29-1182 712-1086 573-636 1088-1179 45-437 474-538 661-706 45-457 474-539 573-636 661-706 711-1086 1088-1180 23-1182 21-1185 249-255 377-392 822-836 3h0gB(5-1147) 0.0 59.01% 4qiwB(4-1069) 0.0 37.02% PF00562(2-386) 1e-58 37.47% PF04566(1-63) 6e-22 71.88% PF04560(1-85) 5e-15 44.57% PF04563(1-342) 2e-10 24.65% PF04565(1-68) 6e-07 42.65% PF04567(1-71) 3e-05 36.62% PF04563 1.8e-115 394.2% PF04565 1.2e-29 109.1% PF04566 2.9e-38 137.7% PF04567 4.7e-24 90.5% PF00562 3.2e-188 635.8% PF04560 5.5e-51 180.0% 1i3qB(1-1080) 0.0 55.52% e.29.1 0.0 1409.5%

Sequence

MYDDEDEMVNDPMDGDYIDDSDEISAEAWQEACWVVISAYFDEKGLVRQQLDSFDEFVQM
NVQRIVEDSPPVELQSENQHLGTDMENPAKFSLKFNQIYLSKPTHWEKDGAPMPMMPNEA
RLRNLTYASPLYVDITKVVTRDDSATEKVYDKVFVGKVPVMLRSSYCMLSNMTDRDLTEL
NECPLDPGGYFVINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTECRSCLENSSRPTST
MWVNMLARGGGGGKKTAMGQRIIGILPYIKQEIPIMIVFRALGFVSDRDILGHIIYDFND
PEMMEMVKPSLDEAFVIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVS
EHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRSLFRNLLKE
MRMTAQKYINKNDDFALDVCVKTSTITRGLTYSLATGNWGDQKKAHQSRAGVSQVLNRLT
YTATLSHLRRANSPIGREGKLAKPRQLHNTQWGMVCPAETPEGQAVGLVKNLALMAYISV
GSLPEPILEFLEEWSMENLEEVSPSAIADATKIFVNGAWVGIHREPDQLMTTLKKLRRQM
DIIVSEVSMVRDIRDREIRIYTDAGRVCRPLLIVENQKLALKKRHIDQLKEAADEANKYT
WSDLVGGGVVELIDSMEEETSMIAMMPEDLRSGGYCDTHTHCEIHPAMILGVCASIIPFP
DHNQSPRNTYQSAMGKQAMGVYTTNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFNELPA
GINAIVAILSYSGYNQEDSVIMNNSAIDRGLFRSVFYRSYRDNEANLDNANEELIEKPTR
EKCSGMRHSLYDKLDEDGIISPGMRVSGDDVIIGKTVALPDIDDDLDASGKKYPKRDAST
FLRSSETGIVDQVMLSLNSDGNKFVKIRMRSVRLPQIGDKFASRHGQKGTMGIMYRQEDM
PFTAEGLTPDIIINPHAVPSRMTIGHLIECLQGKLSANKGEIGDATPFNDTVNVQKISGL
LCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRLKHMVDDKIHSRARGPIQMMNRQP
MEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVSDPYHVYVCNNCGLIVVANLRTNS
FECKACRNKTQVSAVRIPYACKLLFQELMSMSIAPRLMVKPRQSKRSKHQSEA

Region:1-1193
Length:1193aa
Label:Full sequence
Reset:click