Input sequence

Protein name Protocadherin-15
Organism Gallus gallus Length 1899
Disorder content 18.8% ProS content 9.2%
IDEAL NA UniProt Q0ZM14

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1899 1-3 4-1415 1416-1420 1421-1425 1426-1513 1514-1520 1521-1548 1549-1835 1836-1844 1845-1899 4-1415 1426-1513 1521-1548 1836-1844 1-3 1421-1425 1514-1520 1549-1835 1845-1899 1-3 1549-1642 1664-1667 1680-1688 1693-1702 1737-1741 1816-1835 1845-1853 1879-1899 30-247 300-716 725-1149 1065-1242 623-813 30-247 725-1240 300-815 824-1268 141-387 516-606 1045-1109 825-916 739-810 935-1027 152-256 400-500 514-606 621-708 723-810 824-917 931-1027 1041-1135 773-1176 277-681 546-886 1080-1314 133-239 141-257 276-388 389-501 503-607 610-709 711-811 812-918 920-1028 1032-1137 1138-1244 110-119 248-262 702-713 1359-1370 1376-1386 1481-1494 1668-1695 1708-1717 1743-1792 1803-1819 1859-1873 7-26 1377-1399 4apxB(10-227) 8e-101 84.86% 1l3wA(3-439) 3e-24 26.97% 1l3wA(7-445) 2e-23 24.78% 3q2vA(31-211) 7e-11 32.11% 2wcpA(18-208) 6e-11 35.03% 4apxB(10-227) 7e-66 84.86% 1l3wA(7-529) 7e-60 20.78% 1l3wA(3-535) 2e-50 22.69% 1l3wA(7-456) 2e-36 19.18% 2wcpA(3-206) 6e-17 21.12% PF00028(3-92) 5e-08 41.3% PF00028(5-73) 7e-07 47.83% PF00028(2-91) 2e-06 41.49% PF00028(18-92) 3e-06 48.0% PF00028(5-92) 0.0001 34.41% PF00028 9.5e-09 39.7% PF00028 0.00033 24.6% PF00028 2.4e-14 58.2% PF00028 3e-17 67.9% PF00028 4.8e-23 87.1% PF00028 3.6e-17 67.6% PF00028 3.5e-08 37.8% PF00028 1.2e-14 59.3% 1dnvA(12-390) 2e-39 7.56% 2nlzA1(140-529) 8e-38 9.88% 2nlzA1(184-530) 5e-35 8.29% 2nlzA1(194-433) 5e-13 6.61% 1o75A3(56-154) 5e-11 11.11% b.1.6 2.4e-22 78.2% b.1.6 8e-10 36.9% b.1.6 5.4e-16 56.4% b.1.6 2.2e-21 74.9% b.1.6 2.8e-21 74.5% b.1.6 3.7e-23 81.0% b.1.6 2e-25 90.5% b.1.6 8e-19 66.1% b.1.6 1.3e-18 66.5% b.1.6 4.1e-18 64.3%

Sequence

MLQQFCLWKWLAVGIAVATILASSLAQNDEDCKLARTGPPATIVPIDEESRNGTILVDNM
LIKGTAAGPDPTIELSLKDNVDYWVILDPISQRLYLNSTGRVLDRDPPMSIQSIVVQVQC
VNKKVGTIINHEVRIVVRDRNDNSPQFQQQRYYVAVNELTPVGTTIFTGFSGNNGATDID
DGPNGQIEYVIQYNPNDKTSNRTFDIPLTLSGAVVLRERLNYEEKTRYFVIVQANDRAQN
LHERRTSTTTLTVDVLDGDDLGPMFLPCVLVNNTRDCRPLTYQASLPELTDPVHVNPISV
TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPQYFHMNLTTAELTLLKPINRDLHQK
FDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTKSTYEGFILESSPVGTTISDSRNL
TSPLQITVLDNDVEETKDPQLHLFLNDYNTFFTVTQSGITRYLTLLQPVDREAQQLYTFS
MIASDGVQESTPVTVNIVVIDANDNSPTFSNISYNVKIYTDMGPGEGVIKLTAVDADEGP
NGQIVYEILAGDQGDFIINDRTGLIAIAPGVVLSVGRSYALTVKASDSAPPAQRRSSITT
VYIEVLPPNNQSPPRFPQLMYSLEVSEAMRTGAILLNLQAFDREGDPIRYLIENGDPQQV
FNLSQSSGLLALGKPLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVFDMF
LPKNLSVQEEEANAFVGQVRATDPDAGVNGQVHYSLANFKNLFRITSNGSIYTAVKLNRE
VRDYYELIVEATDGAVDPRRSTLTLAIKVLDIDDNSPVFTNASYSVLVPENLPPGTVFLQ
IEAKDVDLGSNVTYRIRTQEALEYFALNKYTGELSLLKSLDYESFSDTDATFTFLVEAFD
SKGTMPPGLATVTVRVKDMNDYSPVFSKTLYRGMVAPDAVKGTVITTVSAEDQDPPGTPA
SRVRYKVDVVQFPYSASIFDVEENSGRVVTRVNLNEEPSTVFKLVVIAYDDGDPVKFNTT
TVEIAVLQPSVIPRFTQDEYRPPPVSESAPKGTVVTVVMAAALNQTIVYSIVSGNEEDVF
AINNRTGVISVKKPLDYERVTSYELRVQADSLQVVRSNLRVPSKSNTAKVFIEVKDENDH
APVFTKKMYIGGVSEDAKMFSSVLKVKADDKDTGNYSAMQYRLIIPPIKDGKEGFVIEAY
TGLIKTAMLFKNMRRSYFKFQVIATDDYGKGLSSKADVLVSVVNQLDMQVIVSNVPPTLV
EQNKDQLIGILERYVQDQIPGATVVVESIGARRFGDGYSEEDYTKSDLMVYAIDPQTNRA
IMRNELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDVVANVKKQAQAVGYTEGALLAL
AVIIILCCMPAILIVMVSYRQRQAECAKTARIQMALPAGKPASTAANNLYEELGDSTILF
LLYHFQQSRGKKSVLEEGDRQRVISSFASRAIEAHKQSNINGSLNNNLPKSSSNITFLSD
ENPLTTQNPLYVEGVTQSPAAAGLLRKRSDALDTLSPMQLVLRDASLGGSHRAWTVPAHV
TKRHAPGSLSRPVIMDPVQWQQERLKAENEGTENQHSRVDISSPLFQKISGPTLTVKEKA
RQFEQQALQEMKQVKSPDVKSTRSPTHSICLQERDNTLEQSPKSVFASPCLRSSPLSSPT
PCEVVEPEPSAVPSVIITHHDYPEELSPPPTRKPTPPSFRIKKPVCQSFLAPQTKGEVTE
NIPDPPKTPPPPPPLLPPPPPSPPLLPPHPPTLPLASVPSSSSLPSTQHLSPAKHSKSPA
KQPAVPPPAAVPEPPPRRELKGILKNIQNLAAIEKSVANMYSQIDKNHVLPKHISKLKPV
ATPELPTPEAAAEHNQQNGNLSCVVEELEKRFPSQSTAL

Region:1-1899
Length:1899aa
Label:Full sequence
Reset:click