Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g04810, chloroplastic
Organism Arabidopsis thaliana Length 952
Disorder content 16.7% ProS content 6.5%
IDEAL NA UniProt Q0WMY5

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 952 1-159 160-952 160-952 1-159 1-13 20-31 78-84 106-118 138-154 555-844 312-634 146-239 282-854 163-239 167-234 167-238 345-379 450-484 485-519 520-554 555-589 590-624 625-659 660-694 695-729 730-764 765-799 800-834 594-808 383-613 768-868 315-421 148-252 122-584 482-850 37-50 58-74 96-132 920-946 4wslA(4-293) 1e-49 34.14% 4wslA(6-293) 2e-44 31.27% 2cjkA(69-161) 1e-05 29.79% 4m57A(41-656) 1e-66 18.35% 2dgsA(9-84) 2e-14 33.77% PF00076(1-68) 4e-07 34.78% PF00076 2.3e-13 55.0% PF01535 3.4e-08 37.8% PF01535 0.00047 24.1% PF01535 1e-06 32.9% PF01535 1.2e-09 42.7% PF01535 5.5e-07 33.8% PF01535 3.3e-09 41.2% PF01535 1.8e-07 35.5% PF01535 0.00017 25.5% PF01535 7.7e-07 33.3% PF01535 8.6e-11 46.4% PF01535 6.7e-09 40.2% PF01535 1.6e-10 45.6% 2fsqA1(3-213) 2e-28 7.8% 2fsqA1(2-232) 5e-26 7.98% 1nnvA(2-95) 7e-11 11.76% 1nnvA(4-105) 9e-11 13.89% 1welA1(2-105) 9e-13 17.14% a.118.8 5.1e-22 70.4% a.118.8 3e-32 111.3%

Sequence

MDNGGSVLSLSAPHFPYSATILRRHSPVASISFSLKQPPPQPPEPPESPPDLRRPEKSIG
SSSSSSSPSPIPSPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSK
LSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPE
FEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKAVEFDGVEFHGRILTVKL
DDGKRLKTKAEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISA
FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM
DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI
IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF
TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA
VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA
KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH
TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM
SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM
NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL
LTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQ
KTFPPDWSSHHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDVNSVSDLLSPYK

Region:1-952
Length:952aa
Label:Full sequence
Reset:click