Input sequence

Protein name RNA polymerase sigma factor sigA
Organism Oryza sativa subsp.japonica Length 520
Disorder content 31.5% ProS content 12.5%
IDEAL NA UniProt Q0J7T6

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 520 1-3 4-35 36-196 197-520 4-35 197-520 1-3 36-196 36-40 47-55 75-93 117-143 159-163 206-518 254-515 281-351 355-435 454-506 216-351 449-506 351-402 97-258 198-351 354-431 414-519 34-48 54-68 84-117 165-186 306-318 1iw7F(9-345) 5e-28 30.57% 4jk1X(253-517) 1e-28 26.57% PF04542 1.7e-18 72.1% PF04539 3.9e-16 64.2% PF04545 5.5e-08 37.1% 1iw7F3(45-184) 4e-12 32.86% 1ku3A(1-58) 1e-08 37.29% 1l0oC(3-55) 2e-05 43.4% a.207.1 3.1e-06 19.2% a.177.1 1.6e-42 144.4% a.4.13 6.4e-07 24.3% a.4.13 2e-15 56.0%

Sequence

MTATPAVIGLSAGNRLLSASFGPTDLMPDKVSLGVGGGGGGGGGGGGGDAMSFAPPAPAT
PKLTAVAAHRLKLSPHGRAQVMRALRHHSSAAAALAPPPPPPPPPTPSPASRAAHAHDLE
SSLEAIVLLQRSMLEKQWELPFDDDNHAMAIGLAEDDDDTSKATVVVARSSVSARQRRMS
GRRRGRTKNGAAHFAVSPELIQSRNRIYLRGTVSKELLTHKQVVHLSHKIKDGIWLQQQR
SKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFLAREMLTMSNLRLVISIAQKYDNLG
VELADLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRALAENSKTFRLPTYLHE
RLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVNKVLSLDQQAFPSLNGLP
GETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTWE
DISRQFGLSRERVRQVGLIAMEKLKHAARRKNLEALLEDY

Region:1-520
Length:520aa
Label:Full sequence
Reset:click