Input sequence

Protein name LDL receptor repeat-containing protein egg-1
Organism Caenorhabditis elegans Length 551
Disorder content 0.0% ProS content 0.0%
IDEAL NA UniProt Q09967

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP TMHMM:TMhelix 0 551 1-551 1-551 122-508 264-489 215-257 121-159 214-251 252-287 290-327 371-413 417-455 456-493 119-159 189-212 213-251 254-287 289-327 378-416 418-455 456-506 47-69 1n7dA(3-321) 2e-33 31.78% 2xrcA(28-255) 2e-08 18.8% 2knxA(6-48) 1e-05 41.86% PF00057 1.6e-10 45.6% PF00057 2.3e-11 48.3% PF00057 4.3e-07 34.2% PF00057 6.9e-05 26.8% PF00057 5e-10 43.9% PF00057 5.5e-07 33.8% PF00057 4.4e-08 37.4% g.12.1 5.4e-10 37.6% g.12.1 0.00024 17.7% g.12.1 4.9e-11 37.9% g.12.1 3.1e-06 22.1% g.12.1 2.3e-07 28.6% g.12.1 6.3e-08 27.7% g.12.1 3.3e-06 24.3% g.12.1 2.1e-09 32.0%

Sequence

MSQQPGSARRVNFPEEPMTLGEKFSHRMDQLKEIIADGGCSRAAKCVSITVCLVLLVLIF
GGAIVYLVMSLTSSAQKMSADSMDISPQAIRHPKFWPPTDKIRFDDLNGIPMTSLFPQNV
STCSGFGFACTGAVHMVIPSSKRCDGRRDCEDGSDEENCKECQSVFSCKLRPEEESKKKG
RSTVQPTLICLTAQHLCDNVENCPDGSDEAVCKSSCSKDQFKCPGSNACLPLSAKCDGIN
DCADASDEKNCSKCQNNAHKCGKQCIKASHVCDGVAQCADGSDEQQCDCQRCSGTDKALC
DDGTCIMRTQVCDGKKDCTDGMDEEDCPGSCTIESFSPKLKMVTCSDGKQYTEAEACSGS
FESCDHDCPNSKCHPKLAFTCPASKEARKMCISRRKVCDGTPDCDDGADEINCTPIKECG
IAKNTQFKCDHKCLDSSRRCDGVWDCEDKSDEKGCDKCPSGTIKCAADKKCLPAFTRCNG
VADCSDGSDELKCSCQECLGVHSNTYMCNESNRCLKRDEVCSPYSMCPNATYTDKAFCAA
LFLKKSGTSPF

Region:1-551
Length:551aa
Label:Full sequence
Reset:click