Input sequence

Protein name Collagen alpha-1(XVII) chain
Organism Mus musculus Length 1470
Disorder content 91.8% ProS content 70.5%
IDEAL NA UniProt Q07563

Prediction

Order Disorder ProS RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1470 1-160 161-167 168-209 210-215 216-223 224-230 231-334 335-374 375-379 380-465 466-521 522-1470 161-167 210-215 335-374 466-521 1-160 168-209 216-223 231-334 380-465 522-1470 1-33 51-68 100-160 181-197 205-209 216-223 231-239 256-274 280-289 303-313 380-442 448-454 461-465 528-540 547-558 564-817 823-868 886-900 905-908 916-971 976-994 1002-1034 1075-1124 1133-1175 1186-1228 1237-1272 1297-1300 1319-1358 1369-1470 694-740 574-633 634-692 693-752 753-812 826-884 1404-1462 696-737 12-28 60-74 317-335 431-461 473-494 592-613 634-651 657-693 741-756 765-804 827-861 864-882 889-927 939-960 981-999 1024-1034 1054-1071 1091-1113 1126-1147 1165-1177 1201-1217 1252-1266 1275-1337 1375-1385 1423-1451 494-521 476-498 2pneA(1-47) 1e-06 36.17% PF01391 8.4e-12 49.8% PF01391 1.3e-05 23.3% PF01391 3.4e-13 54.4% PF01391 9.6e-14 56.3% PF01391 0.00024 0.1% PF01391 4.1e-05 14.4% 1af0A1(2-43) 4e-06 7.14%

Sequence

MDVTKKSKRDGTEVTERIVTETVTTRLTSLPPKGSTSNGYAKTGSLGGGSRLEKQSLTHG
SSGYINSSGSIRGNASTSSYRRTHSPASTLPNSPGSTFERKAHMTRHGTYEGSSSGNSSP
EYPRKELASSSTRGRSQTRESEIRVRLQSASPSTRWTELDEVKRLLKGSRSASASPTRNT
SNTLPIPKKGTVETKTVTASSHSVSGTYDSAILDTNFPPHMWSSTLPAGSSLGTYQNNIT
AQSTSLLNTNAYSTGSVFGVPNNMASCSPTLHPGLSSCSSVFGMQNNLAPSSSVLSHGTT
TASTAYGAKKNVPQPPTVTSTGVSTSATCTTSVQSDDLLHKDCKFLILEKDNTPAKKEME
LLIMTKDSGKVFTASPATISSTSFSEDTLKKEKQAAYAADTCLKADVNGDLNTVSTKSKM
TSAENHGYDRGGGGGRGKGGGAGGGGGGGGASGGGGAWGAAPAWCPCGSCCSWWKWLLGL
LLTWLLLLGLLFGLIALAEEVRKLKARVEELEKTKVLYHDVQMDKSNRDRLQAEAPSLGP
GLGKAELDGYSQEAIWLFVRNKLMTEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIP
GPLGHPGPEGPKGQKGSIGDPGMEGPIGQRGLAGPMGPRGEPGPPGSGEKGDRGIAGEQG
PQGLPGVPGPPGLRGHSGSPGPQGPPGAVGPQGLRGDVGLPGVKGDKGLMGPPGPKGDQG
EKGPRGLTGEPGIRGLPGAVGEPGAKGAMGPAGADGQQGSRGEQGLTGMPGTRGPPGPAG
DPGKPGLTGPQGPQGLPGSPGRPGTKGEPGAPGRVMTSEGSSTITVPGPPGPPGAMGPPG
PPGTPGPAGPAGLPGQQGPRGEPGLAGDSFLSSGSSISEVLSAQGVDLRGPPGPPGPRGP
PGPSIPGPPGPRGPPGEGVPGPPGPPGSFLTDSETFFTGPPGPPGPPGPKGDQGDPGVPG
TPGISGGLSHGASSSTLYMQGPPGPPGPPGPPGSLSSSGQDIQHYIAEYMQSDNIRTYLS
GVQGPPGPPGPPGPVITITGETFDYSQLASQVVSYLRSSGYGAGLSSASSSEDILAMLRR
NDVWQYLRQNLVGPPGPPGPPGVSGDGSLLSLDYGELSRHILNYMSSSGISFGHPGPPGP
PGLPGTSYEELLTMLRGSDYRNIIGPPGPPGPPGMPGNAWSSISVEDLSSYLHTAGLSSI
PGPPGPPGPPGPRGPPGVSAALSTYAAENSDNFRSELISYLTSPDVRSFIVGPPGPPGPQ
GPPGDGHLRENYNWSSNSSARRGTSYSSSTGTGGTNGGSLGEGGAYGAGDGGPYGTDIGP
GGGYGAAAGGGIYGTNGDSFRDGFTGDLDYNKLAVRVSESMQRQGLLQGMAYTVQGPPGP
QGPPGISRVFSAYSNVTQDLMDFFQTYGTIPGPPGQKGDVGTPGPKGDRGPAGPRGPPGP
PGPRGNKGEKGDKGDQVYTGRRKRSIAIKP

Region:1-1470
Length:1470aa
Label:Full sequence
Reset:click