Input sequence

Protein name Basement membrane proteoglycan
Organism Caenorhabditis elegans Length 3375
Disorder content 2.4% ProS content 2.2%
IDEAL NA UniProt Q06561

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3375 1-1 2-135 136-147 148-225 226-230 231-548 549-554 555-671 672-680 681-841 842-845 846-1009 1010-1017 1018-1219 1220-1223 1224-1313 1314-1318 1319-1406 1407-1412 1413-1501 1502-1505 1506-1592 1593-1596 1597-1881 1882-1886 1887-2023 2024-2032 2033-2080 2081-2085 2086-2265 2266-2270 2271-2357 2358-2361 2362-2445 2446-2452 2453-2966 2967-3029 3030-3200 3201-3204 3205-3375 2-135 148-225 231-548 555-671 681-841 846-1009 1018-1219 1224-1313 1319-1406 1413-1501 1506-1592 1597-1881 1887-2023 2033-2080 2086-2265 2271-2357 2362-2445 2453-2966 3030-3200 3205-3375 1-1 672-680 1010-1017 2967-3029 672-680 1010-1017 2967-2976 2982-3029 3178-3359 1135-1667 1712-2249 2086-2517 954-1104 108-277 398-434 636-732 1419-1922 2719-2789 54-131 283-353 1225-1767 1503-2072 1884-2437 51-356 51-348 2365-2530 3178-3359 949-1104 1137-1311 632-718 2711-2785 498-618 790-920 3213-3345 955-992 1011-1048 51-131 277-356 149-183 233-268 59-116 147-183 188-224 231-268 271-363 374-429 498-632 663-718 790-920 955-1002 1011-1058 1061-1109 1131-1217 1240-1296 1319-1404 1416-1500 1520-1575 1611-1665 1712-1769 1793-1879 1886-1971 2367-2422 2460-2516 2562-2694 2713-2747 2754-2784 2818-2944 3213-3342 3159-3359 2772-2950 2498-2691 1772-2070 1421-1685 1121-1387 2290-2525 955-1004 1011-1061 1670-1788 269-356 2173-2249 51-131 149-200 233-268 189-242 2711-2786 684-718 383-429 40-133 140-186 188-224 270-369 384-434 674-723 919-2725 2705-2754 2770-2960 3159-3360 7-18 33-49 209-217 361-382 874-885 1312-1321 2157-2167 2952-2963 2966-3035 3047-3079 3082-3101 3sh4A(3-193) 2e-30 35.6% 3b43A(8-554) 2e-25 21.44% 3b43A(19-557) 6e-21 23.2% 3dmkA(317-758) 2e-16 26.36% 4plmA(245-408) 5e-23 38.37% 1n7dA(51-208) 5e-18 34.27% 4aqsA(385-421) 0.0002 48.65% 1kloA(23-125) 1e-05 36.45% 4pbxA(4-501) 8e-10 20.96% 4xbmB(303-373) 8e-08 35.62% 1gl4B(12-88) 7e-07 43.04% 2yr3A(23-90) 2e-05 40.85% 3b43A(4-550) 3e-67 20.52% 3b43A(5-569) 2e-62 18.76% 3b43A(3-567) 2e-48 19.15% 3dmkA(401-767) 5e-17 14.59% 3dmkA(11-292) 6e-10 16.07% 2rikA(17-187) 5e-21 23.73% 3sh4A(3-193) 5e-28 35.6% 4oveA(245-413) 5e-26 34.29% 2iepA(11-184) 9e-19 24.04% 1kloA(76-160) 2e-06 25.29% 4cudA(43-115) 1e-10 34.21% PF00052(1-124) 2e-17 38.71% PF00052(1-137) 4e-13 36.5% PF00054(1-132) 6e-15 34.81% PF00053(1-37) 5e-07 63.16% PF00053(1-37) 0.0003 55.26% PF07679(6-89) 9e-05 36.78% PF07679(5-84) 0.0001 36.25% PF00057(3-37) 0.0004 57.14% PF00057(3-37) 0.0005 58.33% PF00047 3.1e-08 37.9% PF00057 8e-15 59.8% PF00057 1.9e-17 68.6% PF00057 3.3e-17 67.7% PF07679 5e-07 33.9% PF00053 4.7e-05 26.4% PF00052 2.9e-79 273.9% PF00053 2.8e-06 31.5% PF00052 1.7e-73 254.7% PF00053 1.4e-18 72.3% PF00053 3.9e-15 60.9% PF00053 1.1e-07 36.1% PF07679 0.0002 9.0% PF00047 5.1e-06 30.6% PF07679 0.00075 2.0% PF07679 2.1e-05 20.6% PF00047 1.4e-05 29.1% PF00047 3e-05 28.0% PF00047 0.00019 25.4% PF07679 0.00064 2.9% PF07679 2e-07 35.2% PF00047 3.4e-08 37.8% PF00047 1e-05 29.6% PF02210 5.4e-12 50.5% PF00008 2.7e-06 31.5% PF00008 4.9e-06 30.7% PF02210 6.3e-19 73.5% PF02210 1.5e-43 155.3% 1dykA1(1-187) 2e-26 19.8% 1dykA1(3-177) 1e-11 16.13% 1z78A1(6-190) 2e-06 11.73% 2cb2A1(7-304) 5e-13 9.77% 2cb2A1(34-306) 9e-13 10.64% 2cb2A1(20-290) 2e-11 6.47% 2cb2A1(58-297) 1e-10 10.4% 1kloA2(1-53) 9e-11 34.55% 1kloA2(1-54) 4e-09 33.93% 1wgoA(14-119) 3e-10 9.24% 1h2hA3(18-99) 3e-10 10.23% 1h2hA3(20-94) 7e-05 11.69% 1sy6A2(2-84) 1e-07 12.5% 1n7dA7(3-49) 1e-06 25.0% 1n7dA7(3-37) 1e-06 44.44% 1n7dA7(2-48) 0.0006 35.19% 1lk9A(13-90) 4e-06 14.1% 1kloA3(17-49) 0.0004 42.86% 1kloA3(2-49) 0.0008 32.0% b.1.1 7.3e-17 53.0% g.12.1 4.8e-10 37.7% g.12.1 3.7e-12 41.0% b.1.1 1.1e-20 64.9% g.3.11 1.5e-08 29.5% g.3.11 1.3e-08 29.7% b.29.1 1.6e-30 73.8% g.3.11 2.1e-08 28.1% b.29.1 4.3e-28 67.8% b.29.1 1.7e-61 150.5%

Sequence

MKRSSTVLAALLALLLVATNDAARHRKYRQTYQDIDSDDDDTSDVQITVFPSEKEVRDGR
DVSFECRARTSDNSVYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNG
NTVEARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE
ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQC
HDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQVPRGTTFSLTCKAVAVPE
PYINWRLNWGPVCEPPRCLQTSEGGYGTLTIHDAQPVDQGAYTCEAINVKGRVLATPDCI
VRVVDDPRPQPPQPPTAPPQRASCDTRGAVTPYPNNYGTCECKSQVTGPNCDQCKPGAFH
LSEKSPEGCLKCFCFGVSNDCRSSGHYRTKDRLMFAGDAEGVTISDIEERTIDRNTPFSF
FKTGYLTFDGTTDGVAKYWRLPQRFLGDKVTAYGGKMEFEIEFSGSGHHSSEPMVVLKGN
QNILVHRVRNQEHVLRSDSPVRITVETYETNYEQLNGAAATREDLLMVLADLDAFLIRAT
HVAHQTSTSLGDVSWEIAVDRYTPDGLALEVEQCVCPPGYLGTSCEDCAPGYERSGYGPY
LGTCVPIQPRHQQCGPGAVAPTAPAQGQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCIP
CFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSPQTRAELSGQAIEFRS
FEEARGQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGNSDQSADVILRGNDIALQYKH
REPFYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTYNDDCTDSQLL
SANLEFAEPYGQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCECNGH
ASQCDKEYGYCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRG
CDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDCYLDNEGQVACR
ICPAGLQGRLCNECAPGYTRSNKPAGRVCEPIGQVTNEDITFVQKPHEVLRVRIMEPKRQ
IALPGDRVHWICQVTGYTTEKIHVEWTKVGEMSLPPNAKAYDGYLVLKGVEAENAGQYRC
TATTITQYATDDALLTISKRISGRPPQPVIDPPHLVVNEGEPAAFRCWVPGIPDCQITWH
REQLGGPLPHGVYQTGNALKIPQSQLHHAGRYICSAANQYGTGQSPPAVLEVKKPVIPPK
VDPIRQTVDRDQPARFKCWVPGNSNVQLRWSRPGGAPLPSGVQEQQGILHIPRASDQEVG
QYVCTATDPSDNTPLQSEPVQLNIRDPAPPQRGAAPQIDPPNQTVNVNDPAQFRCWVPGQ
PRAQLKWSRKDGRPLPNGILERDGFLRIDKSQLHDAGEYECTSTEPDGSTQLSPPARLNV
NQPQAIQPQVDPPVQTVNEGEPSRIRCWVPGHPNIQLQFVKRGRRPLPAHARFSQGNLEI
PRTLKSDEDEYICIATDPTTNRPVESNPARVIVKSPIRPIIDPAEQTVPEGSPFKIRCYV
PGHPSVQLTFRRVSGQLNEDADENNGLLAVQRAELTDEGDYICTARDPDTGAPIDSTPAT
VHVTNAAAPPQVEARPPQHPVITPQTQTIPEGDPARIQCTVPGNPSAAQHLSFERVDGKG
LPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP
LLSVAPGSPARFNCVAHSDTPARIRWGFREENGPLPEHVNQDGDDIVISEAGDRNVGEYV
CSATNDFGTGVADPVRLEVTEDQEPPTAVVEPRTWNGKPGERHQFRCITTGSPTPKITWT
GPNGSPLPHDVTPLEPNILDFSNGRSELNGDYTCTASNPIGEASDHGNVNIGPSLTVKTN
PPGPKLIVTVGEPLQVKCEAFGAPGDPEPEVEWLHDPGPERGDLPDDFKPVTISEQFIRH
PNVGLGNAGVYTCKGSSAHATATKNIYIEVVEPSRIATVSILGGSSQWFDQGEKGELICT
ATGSSLVDRLEWEKVDDQLPTDVEEHNEPGLLHFPSFKNSYAGEYRCNGYRNNEIIASAA
VHVHSSANADDEPKVEIEPPRVRVVSQGDNIVLKCSVQGAENGEHFKWALLRGGSLVRQL
GTEPTLEITKADPSNDFGVYRCNVEDNNGLVIGSAFTAVSVGQQDKSHAQIVKFDDKSDA
SFTCPIYSVPGSKVDWTYENGDLPSKAVPNGNKIEIKEFDDASAGTYVCKVSFDGNVVEG
FVTAQMFVPDTIIQVLLEVSSESPQIGDRAWFDCKVTGDPSAVISWTKEGNDDLPPNAQV
TGGRLLFTDLKEDNAGVYRCVAKTKAGPLQTRTVLNVGSGKQDQVTFTVADSLPVVYTVG
QPAYLSCIGKTETKPNQSVVWTKEEGDLPSGSRVEQGVLMLPSVHRDDEGSYTCEIVKEE
NPVFSTVDLQIDDFIPVIDGEPIELPPLSDEEIVNLDIEITLNTANPKGIIFETKRINSG
DLLATPYDTIHHEAKITDYGTVLYEFDIGNGRQIVETTNPINPNEWNVIKIKNDKNQVTI
QLNDESATIRQHTNPLPSLSTGVNRPVFIGGRHEPTNEANDFRGIISQVVLSGHNVGLGD
ARIPSSVVKYDACASTNLCLNGANCRNANNHHGFSCECAEEFHGEYCQWRSNSCHDESCN
TGICLDNEESWQCVCPLGTTGLRCEEKTEIPQPLGFTSDTSFLAVKRPVKFESIKMKLRP
QADSDEHILMYFASDYGSNTKQYTSLSLIANQVVLTVRRPDKEVQKIRSETLEAGELIDV
AVRQAGNALVMTVDGNQVSTIETDTLKPGTEIFIGGLPPGLNSPDDVVEQSFQGCVYEIL
INSQDVDLQNLSSSGDISSCEESQFPVEEDDTTTTTTTEEPEAVIEEPTTEEPTTTEEPI
TEEPTEEPTTTEEPTTTEEPTTTTEEPTTTTTEEPYHIYETSRDDDPEIIIPVETTTTST
TTTSTTEEPEAEPALVLPTDPVEENDVSDEEEEISTISTVSPDNGLDSDSDYSEGTLPPD
SSSEEIVVGDVYSTQEPNNICANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIE
HAARFDGDAFIELSSDEFPHLTSEKDEIVAFKFKTEQQNGVLLWQGQRPTVQQMEDYISV
GIVNGHLHFSYELGGGAAHLISEERVDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGI
LAMLNVDGNIFVGGVPDISKATGGLFSNNFVGCIADVELNGVKLDLMATAIDGKNVKPCD
EWMHRKRWLYRRRVR

Region:1-3375
Length:3375aa
Label:Full sequence
Reset:click