Input sequence

Protein name Basement membrane-specific heparan sulfate proteoglycan core protein
Organism Mus musculus Length 3707
Disorder content 2.4% ProS content 2.1%
IDEAL NA UniProt Q05793

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3707 1-77 78-1667 1668-1675 1676-1765 1766-1778 1779-1858 1859-1862 1863-2138 2139-2148 2149-2335 2336-2341 2342-2438 2439-2442 2443-3704 3705-3707 78-1667 1676-1765 1779-1858 1863-2138 2149-2335 2342-2438 2443-3704 1-77 1668-1675 3705-3707 5-77 3705-3707 3514-3707 1769-1857 2149-2703 2434-2981 1882-2614 196-425 3254-3404 2992-3149 764-926 1159-1327 1516-1667 406-486 3166-3252 3444-3493 1669-1752 2149-2704 2433-2981 1682-2232 3514-3707 3254-3419 2992-3161 1129-1328 758-924 1530-1662 405-488 3412-3493 3166-3239 285-361 325-403 987-1221 2899-3067 199-234 3274-3405 3552-3678 3013-3148 990-1116 1396-1528 595-714 2541-2616 408-486 2902-2979 2160-2232 1961-2026 2260-2331 2063-2135 2626-2703 764-801 1159-1196 1563-1600 285-319 325-359 79-181 197-234 283-319 323-359 366-403 406-489 595-729 764-811 814-869 878-921 990-1124 1159-1206 1209-1263 1275-1322 1396-1528 1563-1610 1613-1668 1676-1762 1771-1859 1865-1949 1969-2023 2066-2120 2149-2232 2261-2315 2344-2430 2434-2523 2533-2616 2634-2688 2735-2789 2808-2893 2897-2979 3013-3146 3166-3198 3274-3402 3425-3457 3464-3492 3551-3680 3225-3420 3480-3707 2410-2703 1762-2034 2718-2979 2085-2331 1568-1856 2220-2523 2981-3163 404-488 764-814 1159-1209 1209-1265 83-186 325-378 285-334 368-403 196-235 1275-1319 3412-3494 3166-3194 814-871 197-247 283-319 322-362 404-491 728-3164 3162-3202 3224-3436 3421-3461 3478-3706 9-20 53-78 253-267 934-939 1481-1492 2037-2061 2817-2827 3sh4A(1-195) 4e-95 86.15% 1gl4B(1-89) 8e-46 100.0% 3b43A(4-567) 7e-39 26.22% 3b43A(4-569) 6e-33 24.49% 3dmkA(22-770) 9e-26 22.97% 1n7dA(39-220) 2e-28 32.64% 3pveA(12-158) 4e-23 43.05% 3pveA(11-159) 5e-16 34.59% 4aqsA(238-421) 9e-23 34.95% 4aqsA(238-421) 8e-22 33.51% 1kloA(4-158) 8e-16 34.97% 2wimA(186-266) 2e-06 33.73% 4xbmB(298-384) 5e-11 38.2% 2vj2A(94-148) 2e-09 45.45% 4p2yA(211-288) 0.0006 28.57% 3b43A(4-568) 2e-94 24.32% 3b43A(4-569) 1e-93 22.39% 3b43A(11-567) 3e-85 20.89% 3sh4A(1-195) 8e-57 85.64% 3pveA(12-173) 1e-29 40.36% 3pveA(11-171) 5e-26 32.16% 4oveA(223-420) 3e-23 21.53% 4oveA(245-420) 2e-22 28.89% 4oveA(270-412) 4e-18 26.35% 2wp3O(4-86) 7e-20 25.0% 4cudA(32-115) 3e-15 37.21% 4cudA(45-115) 3e-10 22.97% 2lgpA(7-92) 2e-12 43.02% 2lgpA(7-90) 2e-10 34.52% 3tbdA(100-330) 6e-08 16.39% 4pbxA(2-178) 0.0002 16.95% 2i1pA(7-42) 6e-06 47.22% PF00054(1-132) 4e-24 46.62% PF00054(2-127) 1e-22 44.96% PF00054(1-131) 6e-14 37.68% PF00052(1-130) 4e-17 36.64% PF00052(1-137) 2e-14 39.13% PF00052(1-123) 9e-14 36.51% PF07679(8-89) 4e-11 43.9% PF07679(1-79) 1e-08 37.97% PF07679(6-89) 2e-05 33.33% PF07679(11-89) 3e-05 35.44% PF07679(6-77) 0.0001 37.5% PF07679(13-89) 0.0002 39.74% PF07679(11-89) 0.0004 34.18% PF07679(6-89) 0.0005 34.52% PF00053(1-37) 3e-08 60.53% PF00053(1-37) 3e-05 52.63% PF00053(1-37) 0.0002 57.89% PF00057(3-37) 4e-06 57.14% PF00057(3-37) 0.0002 57.14% PF01390 1.1e-10 46.1% PF00057 7.5e-12 50.0% PF00057 1.1e-13 56.1% PF00057 1.1e-13 56.1% PF00057 6e-11 47.0% PF07679 1.9e-13 55.2% PF00052 1.9e-21 81.9% PF00053 1.1e-19 76.0% PF00053 9e-09 39.7% PF00053 0.0005 16.1% PF00052 4.9e-29 107.1% PF00053 3.4e-17 67.7% PF00053 2.7e-07 34.9% PF00053 3.5e-14 57.7% PF00052 4.6e-32 117.1% PF00053 4e-16 64.2% PF00053 4.3e-06 30.8% PF07679 8.1e-12 49.9% PF07686 2.5e-09 41.6% PF07679 3.3e-11 47.8% PF00047 1.1e-10 46.1% PF00047 5.2e-12 50.5% PF07679 3.4e-13 54.4% PF00047 3.8e-11 47.6% PF07679 0.0001 12.3% PF07679 1.9e-09 42.0% PF07679 7.3e-18 70.0% PF00047 6.2e-09 40.3% PF00047 2.1e-08 38.6% PF07679 2.2e-12 51.7% PF07679 1.3e-14 59.2% PF02210 2.2e-40 144.8% PF00008 7.8e-05 26.7% PF02210 4e-43 153.9% PF00008 2.1e-07 35.2% PF00008 1.3e-05 29.2% PF02210 2.2e-40 144.7% 1dykA1(2-188) 2e-26 20.81% 1dykA1(3-189) 3e-20 23.14% 2cb2A1(1-304) 8e-23 11.0% 2cb2A1(21-300) 4e-19 8.39% 2cb2A1(26-304) 5e-19 9.64% 2cb2A1(70-304) 4e-15 11.33% 2cb2A1(26-304) 1e-12 8.78% 2cb2A1(9-304) 1e-09 6.75% 1d2sA(4-170) 3e-17 15.3% 1witA(1-84) 4e-13 20.0% 1kloA2(1-54) 1e-10 35.71% 1kloA2(1-54) 5e-10 26.79% 1kloA2(1-53) 8e-05 28.07% 1ivzA(13-125) 1e-10 9.65% 1n7dA7(3-50) 3e-08 37.04% 1n7dA7(3-49) 4e-08 36.0% 1n7dA7(3-37) 1e-05 47.22% 1n7dAa(2-40) 0.0004 40.0% 1kloA3(1-48) 3e-07 35.42% 1rfxA(6-84) 5e-07 13.1% 1b9wA1(7-35) 0.0001 17.24% 1kloA1(1-52) 0.0002 32.76% g.12.1 2.1e-10 35.2% g.12.1 7e-11 36.8% g.12.1 3.8e-11 38.3% b.1.1 3.2e-23 79.0% b.29.1 1.4e-53 131.0% g.3.11 4.1e-07 24.3% b.29.1 9e-63 153.7% g.3.11 3.4e-09 31.0% b.29.1 8.9e-54 131.4%

Sequence

MGQRAVGSLLLGLLLHARLLAVTHGLRAYDGLSLPEDTETVTASRYGWTYSYLSDDEDLL
ADDASGDGLGSGDVGSGDFQMVYFRALVNFTRSIEYSPQLEDASAKEFREVSEAVVEKLE
PEYRKIPGDQIVSVVFIKELDGWVFVELDVGSEGNADGSQIQEVLHTVVSSGSIGPYVTS
PWGFKFRRLGTVPQFPRVCTETEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVPE
LSSSTPAVGKVSPLPLWPEAATTPPPPVTHGPQFLLPSVPGPSACGPQEASCHSGHCIPR
DYLCDGQEDCRDGSDELGCASPPPCEPNEFACENGHCALKLWRCDGDFDCEDRTDEANCS
VKQPGEVCGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPQQSIQASR
GQTVTFTCVATGVPTPIINWRLNWGHIPAHPRVTMTSEGGRGTLIIRDVKEADQGAYTCE
AMNSRGMVFGIPDGVLELVPQRGPCPDGHFYLEDSASCLPCFCFGVTNVCQSSLRFRDQI
RLSFDQPNDFKGVNVTMPSQPGVPPLSSTQLQIDPALQEFQLVDLSRRFLVHDAFWALPK
QFLGNKVDSYGGFLRYKVRYELARGMLEPVQKPDVILVGAGYRLHSRGHTPTHPGTLNQR
QVQLSEEHWVHESGRPVQRAEMLQALASLEAVLLQTVYNTKMASVGLSDIVMDTTVTHTT
IHGRAHSVEECRCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHC
LNCQHNTEGPQCDKCKPGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDGQATCD
ACAPGYTGRRCESCAPGYEGNPIQPGGKCRPTTQEIVRCDERGSLGTSGETCRCKNNVVG
RLCNECSDGSFHLSKQNPDGCLKCFCMGVSRQCSSSSWSRAQVLGASEQPSQFSLSNAAG
THTTSEGVSSPAPGELSFSSFHNLLSEPYFWSLPASFRGDKVTSYGGELRFTVMQRPRPS
SAPLHRQPLVVLQGNNIVLEHHASRDPSPGQPSNFIVPFQEQAWQRPDGQPATREHLLMA
LAGIDALLIQASYTQQPAESRLSGISMDVAVPENTGQDSAREVEQCTCPPGYRGPSCQDC
DTGYTRVPSGLYLGTCERCNCHGHSETCEPETGACQSCQHHTEGASCEQCQPGYYGDAQR
GTPQDCQPCPCYGAPAAGQAAHTCFLDTDGHPTCDSCSPGHSGRHCERCAPGYYGNPSQG
QPCHRDGQVPEVLGCGCDPHGSISSQCDAAGQCQCKAQVEGRSCSHCRPHHFHLSASNPE
GCLPCFCMGVTQQCASSSYSRQLISTHFAPGDFQGFALVNPQRNSQLTGGFTVEPVHDGA
RLSFSNFAHLGQESFYWQLPEIYQGDKVAAYGGKLRYTLSYTAGPQGSPLLDPDIQITGN
NIMLVASQPALQGPERRSYEIIFREEFWRRPDGQPATREHLLMALADLDELLVRATFSSV
PRAASISAVSLEGAQPGPSSGPRALEVEECRCPPGYVGLSCQDCAPGYTRTGSGLYLGQC
ELCECNGHSDLCHPETGACSRCQHNTAGEFCELCATGYYGDATAGTPEDCQPCACPLTNP
ENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPGYEGDPNVQGGRCQPLTKESLEVQI
HPSRSVVPQGGPHSLRCQVSGSPPHYFYWSREDGRPLPSSAQQRHQGSELHFPSVQPSDA
GVYICTCRNLIHTSNSRAELLVAEAPSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPA
YTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQVSG
TSTAPVASIHPPQLTVQPGQQAEFRCSATGNPTPMLEWIGGPSGQLPAKAQIHNGILRLP
AIEPSDQGQYLCRALSSAGQHVARAMLQVHGGSGPRVQVSPERTQVHEGRTVRLYCRAAG
VPSASITWRKEGGSLPFRHQAHGSRLRLHHMSVADSGEYVCRANNNIDAQETSIMISVSP
STNSPPAPASPAPIRIESSSSRVAEGQTLDLNCVVPGHAHAQVTWHKRGGSLPTHHQTHG
SRLRLYQVSSADSGEYVCSVLSSSGPLEASVLVSITPAAANVHIPGVVPPIRIETSSSRV
AEGQTLDLSCVVPGQAHAQVTWHKRGGSLPAGHQVHGHMLRLNRVSPADSGEYSCQVTGS
SGTLEASVLVTIEASEPSPIPAPGLAQPVYIESSSSHLTEGQTVDLKCVVPGQAHAQVTW
HKRGSSLPARHQTHGSLLRLYQLSPADSGEYVCQVAGSSHPEHEASFKLTVPSSQNSSFR
LRSPVISIEPPSSTVQQGQDASFKCLIHEGAMPIKVEWKIRDQELEDNVHISPNGSIITI
VAPGPATMEPTACVASNVYGMAQSVVNLSVHGPPTVSVLPEGPVHVKMGKDITLECISSG
EPRSSPRWTRLGIPVKLEPRMFGLMNSHAMLKIASVKPSDAGTYVCQAQNALGTAQKQVE
LIVDTGTVAPGTPQVQVEESELTLEAGHTATLHCSATGNPPPTIHWSKLRAPLPWQHRIE
GNTLVIPRVAQQDSGQYICNATNSAGHTEATVVLHVESPPYATIIPEHTSAQPGNLVQLQ
CLAHGTPPLTYQWSLVGGVLPEKAVVRNQLLRLEPTVPEDSGRYRCQVSNRVGSAEAFAQ
VLVQGSSSNLPDTSIPGGSTPTVQVTPQLETRNIGASVEFHCAVPNERGTHLRWLKEGGQ
LPPGHSVQDGVLRIQNLDQNCQGTYVCQAHGPWGQAQATAQLIVQALPSVLINVRTSVHS
VVVGHSVEFECLALGDPKPQVTWSKVGGHLRPGIVQSGTIIRIAHVELADAGQYRCAATN
AAGTTQSHVLLLVQALPQISTPPEIRVPAGSAAVFPCMASGYPTPAITWSKVDGDLPPDS
RLENNMLMLPSVRPEDAGTYVCTATNRQGKVKAFAYLQVPERVIPYFTQTPYSFLPLPTI
KDAYRKFEIKITFRPDSADGMLLYNGQKRSPTNLANRQPDFISFGLVGGRPEFRFDAGSG
MATIRHPTPLALGQFHTVTLLRSLTQGSLIVGNLAPVNGTSQGKFQGLDLNEELYLGGYP
DYGAIPKAGLSSGFVGCVRELRIQGEEIVFHDVNLTTHGISHCPTCQDRPCQNGGQCQDS
ESSSYTCVCPAGFTAAAVNIRKPCTATPSLWADATCVNRPDGRGYTCRCHLGRSGVRCEE
GVTVTTPSMSGAGSYLALPALTNTHHELRLDVEFKPLEPNGILLFSGGKSGPVEDFVSLA
MVGGHLEFRYELGSGLAVLRSHEPLALGRWHRVSAERLNKDGSLRVDGGRPVLRSSPGKS
QGLNLHTLLYLGGVEPSVQLSPATNMSAHFHGCVGEVSVNGKRLDLTYSFLGSQGVGQCY
DSSPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGAR
CLCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFYDNGFLGLPGNSFSRSL
PEVPETIEFEVRTSTADGLLLWQGVVREASRSKDFISLGLQDGHLVFSYQLGSGEARLVS
GDPINDGEWHRITALREGQRGSIQVDGEDLVTGRSPGPNVAVNTKDIIYIGGAPDVATLT
RGKFSSGITGCIKNLVLHTARPGAPPPQPLDLQHRAQAGANTRPCPS

Region:1-3707
Length:3707aa
Label:Full sequence
Reset:click