Input sequence

Protein name Collagen alpha-1(IX) chain
Organism Mus musculus Length 921
Disorder content 73.5% ProS content 73.5%
IDEAL NA UniProt Q05722

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 921 1-24 25-26 27-246 247-921 1-24 27-246 25-26 247-921 25-26 247-921 42-256 486-564 418-493 42-256 486-564 417-498 269-328 329-387 388-447 448-507 508-567 568-627 628-687 697-756 787-846 56-245 415-583 8-256 269-326 349-376 379-403 594-632 639-664 676-694 721-742 787-811 837-855 878-899 7-24 2uurA(1-210) 8e-107 86.51% 2pneA(2-81) 8e-08 42.5% 2pneA(3-79) 1e-05 39.24% 2uurA(1-210) 9e-65 86.51% 2pneA(2-81) 2e-09 42.5% 2pneA(2-81) 2e-07 36.59% PF01391 2e-12 51.9% PF01391 6.9e-06 28.8% PF01391 4.1e-05 14.4% PF01391 4.8e-12 50.6% PF01391 6.8e-15 60.1% PF01391 3.8e-10 44.3% PF01391 2.4e-11 48.3% PF01391 3e-10 44.7% PF01391 4.2e-12 50.8% 1z78A1(3-195) 5e-17 15.0% 1af0A1(57-221) 2e-09 13.61% b.29.1 1.8e-12 38.3%

Sequence

MKNFWKISVFFCVCSCLGPWVSATLKRRARFPANSISNGGSELCPKIRIGQDDLPGFDLI
SQFQIEKAASRRTIQRVVGSTALQVAYKLGSNVDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLEKHWNIWQIQDSAGREQVGVKINGQTKSVAFSYKGLDGSLQTAAFLNLPSLFDSRW
HKLMIGVERTSATLFIDCIRIESLPIKPRGQIDADGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCHELPIRITTSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGDPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGTTGLPGELGRVGPIGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGDK
GEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGSPGPKGDTGLP
GVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQL
GSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLPGLPGPPGLP
GMKGDRGVFGEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIR
GLPGVEGPRGPPGPRGMQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVVQEHFVEMAAS
LKRPDTGASGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEK
GERGPPGRGPKGLPGAIGLPGDPGPASYGKNGRDGEQGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQSGQRAFSKGPDK

Region:1-921
Length:921aa
Label:Full sequence
Reset:click