Input sequence

Protein name Cyclic nucleotide-gated cation channel
Organism Caenorhabditis elegans Length 733
Disorder content 26.1% ProS content 8.7%
IDEAL NA UniProt Q03611

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 733 1-107 108-621 622-630 631-658 659-733 108-621 631-658 1-107 622-630 659-733 32-54 98-107 622-626 659-679 729-733 419-604 321-546 514-610 633-677 514-601 206-410 511-604 419-619 278-415 115-439 418-619 309-320 498-513 631-658 121-140 309-331 389-411 4d7sA(2-181) 3e-25 30.11% 16vpA(85-306) 2e-28 5.73% 4chvA(250-340) 8e-23 25.74% 3swyA(2-46) 2e-06 37.78% PF00027(4-88) 1e-05 34.07% PF00520 3e-17 67.9% PF00027 9.2e-21 79.6% 1q3eA(2-192) 2e-26 25.37% 1p7bA2(3-115) 3e-10 14.39% f.14.1 1.2e-27 96.1% b.82.3 9.8e-46 159.2%

Sequence

MSTAEPAPDPTNPSTSGLAPTTNGIGSPPPTASAATKFSILTKFLRRKNQVHTTTAQQNE
FMQKYMPNGNSNAVQPAATGGQPASSDGGSAIEVPPPKESYAVRIRKYLANYTQDPSTDN
FYYWTCVVTVAYIYNLLFVIARQVFNDLIGPSSQSLCRFYNGTLNSTTQVECTYNMLTNM
KEMPTYSQYPDLGWSKYWHFRMLWVFFDLLMDCVYLIDTFLNYRMGYMDQGLVVREAEKV
TKAYWQSKQYRIDGISLIPLDYILGWPIPYINWRGLPILRLNRLIRYKRVRNCLERTETR
SSMPNAFRVVVVVWYIVIIIHWNACLYFWISEWIGLGTDAWVYGHLNKQSLPDDITDTLL
RRYVYSFYWSTLILTTIGEVPSPVRNIEYAFVTLDLMCGVLIFATIVGNVGSMISNMSAA
RTEFQNKMDGIKQYMELRKVSKQLEIRVIKWFDYLWTNKQSLSDQQVLKVLPDKLQAEIA
MQVHFETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQV
VDDDGKKVFVTLQEGSVFGELSILNIAGSKNGNRRTANVRSVGYTDLFVLSKTDLWNALR
EYPDARKLLLAKGREILKKDNLLDENAPEEQKTVEEIAEHLNNAVKVLQTRMARLIVEHS
STEGKLMKRIEMLEKHLSRYKALARRQKTMHGVSIDGGDISTDGVDERVRPPRLRQTKTI
DLPTGTESESLLK

Region:1-733
Length:733aa
Label:Full sequence
Reset:click