Input sequence

Protein name Collagen alpha-1(VII) chain
Organism Homo sapiens Length 2944
Disorder content 51.6% ProS content 50.2%
IDEAL NA UniProt Q02388

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 2944 1-9 10-17 18-23 24-157 158-161 162-187 188-191 192-224 225-229 230-321 322-328 329-348 349-352 353-363 364-368 369-402 403-408 409-492 493-497 498-504 505-510 511-593 594-599 600-991 992-1043 1044-1151 1152-1188 1189-1218 1219-1287 1288-1368 1369-1645 1646-1689 1690-1802 1803-1808 1809-1812 1813-1851 1852-1874 1875-1880 1881-2395 2396-2410 2411-2590 2591-2611 2612-2808 2809-2866 2867-2878 2879-2932 2933-2944 10-17 24-157 162-187 192-224 230-321 329-348 353-363 369-402 409-492 511-593 600-991 1044-1151 1189-1218 1288-1368 1646-1689 1803-1808 1813-1851 1875-1880 2396-2410 2591-2611 2809-2866 2879-2932 1-9 18-23 322-328 498-504 992-1043 1152-1188 1219-1287 1369-1645 1690-1802 1809-1812 1852-1874 1881-2395 2411-2590 2612-2808 2867-2878 2933-2944 1-9 18-23 322-328 498-504 1013-1034 1152-1188 1219-1287 1369-1645 1690-1802 1809-1812 1852-1874 1881-2395 2411-2590 2612-2808 2933-2944 507-857 685-1041 234-477 37-216 1054-1204 2874-2931 2625-2707 36-218 1046-1234 234-413 692-862 873-1045 782-952 2874-2931 337-683 600-775 2624-2707 2490-2560 1717-1782 2101-2163 38-187 1070-1206 2876-2929 38-211 232-319 328-407 415-493 507-587 598-677 686-765 775-853 867-946 955-1040 1054-1229 1263-1322 1332-1391 1462-1521 1522-1580 1586-1645 1646-1705 1719-1778 1779-1838 1842-1901 1974-2033 2034-2093 2108-2167 2174-2232 2233-2292 2330-2388 2395-2454 2466-2525 2527-2586 2587-2646 2650-2709 2716-2774 2875-2930 17-228 1048-1235 2874-2929 248-331 789-979 428-621 690-776 589-685 333-395 962-1042 2490-2701 1655-1784 31-223 232-325 332-413 430-522 507-593 593-683 685-771 781-868 862-952 961-1052 1048-1235 2872-2929 478-489 1277-1290 1319-1395 1399-1474 1512-1532 1574-1596 1610-1652 1691-1706 1785-1803 1815-1839 1878-1919 2006-2018 2039-2092 2165-2251 2272-2294 2304-2320 2335-2351 2369-2407 2428-2455 2463-2487 2572-2602 2712-2737 2745-2784 2840-2865 1fnfA(1-358) 3e-20 28.26% 1fnfA(1-359) 3e-15 24.2% 1fnhA(2-244) 4e-19 29.08% 4cn9A(9-197) 1e-14 32.46% 4igiA(3-153) 1e-06 26.32% 1kthA(3-57) 2e-11 48.28% 2pneA(2-79) 2e-05 37.35% 1lfaA(2-182) 4e-43 23.78% 1ijbA(7-196) 3e-12 12.5% 1qr4A(2-175) 6e-24 23.2% 1qr4A(6-175) 7e-20 18.02% 1qr4A(6-174) 6e-14 24.57% 1qr4A(6-175) 3e-11 18.39% 1ld6A(3-57) 1e-18 34.48% 3t1wA(13-365) 3e-16 24.09% 2jllA(196-381) 2e-09 20.0% 2pneA(1-79) 3e-08 36.9% 2pneA(9-79) 1e-05 35.21% 2pneA(4-67) 4e-05 37.88% 2pneA(8-71) 5e-05 35.94% PF00092(1-148) 1e-12 36.71% PF00092(22-150) 1e-06 33.1% PF00014(2-52) 7e-09 53.7% PF00092 4.9e-59 206.7% PF00041 1.6e-19 75.5% PF00041 1.9e-10 45.3% PF00041 8.7e-07 33.1% PF00041 5.2e-08 37.2% PF00041 2.2e-10 45.1% PF00041 2e-14 58.5% PF00041 2e-10 45.3% PF00041 8.5e-13 53.1% PF00041 0.00034 24.5% PF00092 2.5e-23 88.1% PF01391 1e-13 56.1% PF01391 8.8e-06 26.8% PF01391 2e-11 48.6% PF01391 4.4e-05 13.7% PF01391 6.6e-12 50.2% PF01391 1e-14 59.5% PF01391 1.9e-12 52.0% PF01391 4.7e-13 54.0% PF01391 4.7e-10 44.0% PF01391 3.1e-05 16.6% PF01391 1.7e-11 48.8% PF01391 2.4e-16 64.9% PF01391 1.1e-05 24.9% PF01391 3.2e-14 57.8% PF01391 5.7e-06 30.3% PF01391 1.2e-10 46.0% PF01391 1.2e-12 52.6% PF01391 6.1e-12 50.3% PF01391 5.4e-13 53.8% PF01391 6.1e-12 50.3% PF01391 3.1e-06 31.3% PF00014 5.7e-24 90.2% 1auqA(1-207) 5e-32 19.72% 1aoxA(2-196) 3e-12 17.33% 1aalA(3-55) 2e-20 35.71% 1q38A(1-79) 2e-12 19.05% 1cfmA1(2-186) 9e-12 11.92% 1cfmA1(2-186) 1e-08 11.06% 1fnaA(1-91) 3e-11 24.18% 1x5zA1(2-101) 2e-07 18.0% 2ibbA1(13-77) 1e-05 23.08% 1a22B1(4-84) 7e-07 12.35% 1af0A1(11-221) 3e-08 14.15% 1af0A1(84-217) 6e-05 16.91% c.62.1 1.2e-53 180.9% b.1.2 1.1e-20 71.2% b.1.2 3.1e-14 45.8% b.1.2 2.7e-14 48.1% b.1.2 6e-15 51.2% b.1.2 1.5e-14 48.7% b.1.2 3.9e-20 68.6% b.1.2 8.3e-15 47.7% b.1.2 3e-18 60.7% b.1.2 8.5e-12 37.9% c.62.1 3.1e-29 97.0% g.8.1 6.8e-17 53.7%

Sequence

MTLRLLVAALCAGILAEAPRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRSNFREVRSF
LEGLVLPFSGAASAQGVRFATVQYSDDPRTEFGLDALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADHVFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNADP
EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTRPPDDSTSAPRDLVL
SEPSSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNVPAGETSVRLRGLRPL
TEYQVTVIALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVPGATGYRVTW
RVLSGGPTQQQELGPGQGSVLLRDLEPGTDYEVTVSTLFGRSVGPATSLMARTDASVEQT
LRPVILGPTSILLSWNLVPEARGYRLEWRRETGLEPPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGHEVATPATVVPTGPELPVSPVTDLQATELPGQRVRVSWSPVPGATQYRII
VRSTQGVERTLVLPGSQTAFDLDDVQAGLSYTVRVSARVGPREGSASVLTVRREPETPLA
VPGLRVVVSDATRVRVAWGPVPGASGFRISWSTGSGPESSQTLPPDSTATDITGLQPGTT
YQVAVSVLRGREEGPAAVIVARTDPLGPVRTVHVTQASSSSVTITWTRVPGATGYRVSWH
SAHGPEKSQLVSGEATVAELDGLEPDTEYTVHVRAHVAGVDGPPASVVVRTAPEPVGRVS
RLQILNASSDVLRITWVGVTGATAYRLAWGRSEGGPMRHQILPGNTDSAEIRGLEGGVSY
SVRVTALVGDREGTPVSIVVTTPPEAPPALGTLHVVQRGEHSLRLRWEPVPRAQGFLLHW
QPEGGQEQSRVLGPELSSYHLDGLEPATQYRVRLSVLGPAGEGPSAEVTARTESPRVPSI
ELRVVDTSIDSVTLAWTPVSRASSYILSWRPLRGPGQEVPGSPQTLPGISSSQRVTGLEP
GVSYIFSLTPVLDGVRGPEASVTQTPVCPRGLADVVFLPHATQDNAHRAEATRRVLERLV
LALGPLGPQAVQVGLLSYSHRPSPLFPLNGSHDLGIILQRIRDMPYMDPSGNNLGTAVVT
AHRYMLAPDAPGRRQHVPGVMVLLVDEPLRGDIFSPIREAQASGLNVVMLGMAGADPEQL
RRLAPGMDSVQTFFAVDDGPSLDQAVSGLATALCQASFTTQPRPEPCPVYCPKGQKGEPG
EMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPG
APGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRG
PLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGP
PGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPP
GPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVG
PAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGR
PGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGE
DGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPG
APGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAG
KAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKG
DSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGS
KGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGP
KGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPG
IPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPG
PGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGM
AGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLT
GPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSP
GLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGE
KGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAP
GVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDK
GDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKG
DSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLR
GLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEK
GDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEK
GERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPG
APGERGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYA
ADTAGSQLHAVPVLRVSHAEEEERVPPEDDEYSEYSEYSVEEYQDPEAPWDSDDPCSLPL
DEGSCTAYTLRWYHRAVTGSTEACHPFVYGGCGGNANRFGTREACERRCPPRVVQSQGTG
TAQD

Region:1-2944
Length:2944aa
Label:Full sequence
Reset:click