Input sequence

Protein name Voltage-dependent N-type calcium channel subunit alpha-1B
Organism Rattus norvegicus Length 2336
Disorder content 41.2% ProS content 24.6%
IDEAL NA UniProt Q02294

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2336 1-68 69-401 402-461 462-746 747-1117 1118-1872 1873-2336 69-401 462-746 1118-1872 1-68 402-461 747-1117 1873-2336 1-17 42-45 53-68 402-421 426-455 747-793 798-818 824-829 836-843 848-859 864-870 884-887 922-931 944-1012 1021-1037 1049-1053 1062-1066 1072-1082 1087-1101 1879-1895 1905-1911 1919-1945 1964-1967 1976-2017 2032-2048 2064-2090 2096-2108 2124-2133 2149-2170 2180-2186 2198-2201 2249-2262 2271-2280 2287-2292 2304-2314 2324-2336 363-407 1244-1271 1851-1872 363-407 1709-1803 1793-1868 1244-1271 1184-1379 137-355 1508-1707 519-708 132-355 517-709 1183-1417 1507-1707 1469-1556 1144-1275 479-589 91-219 1521-1597 32-364 476-718 1141-1426 1472-1711 9-40 226-242 594-606 609-627 729-740 847-859 909-919 922-939 1100-1111 1396-1414 1566-1575 2049-2059 2098-2123 2285-2301 706-746 95-114 134-156 220-242 333-355 483-505 515-537 610-632 688-710 1145-1167 1187-1209 1216-1238 1284-1306 1353-1372 1397-1419 1469-1491 1511-1533 1540-1562 1604-1626 1685-1707 4dexB(1-45) 2e-18 100.0% 2lcmA(1-28) 1e-07 100.0% 3dveB(2-23) 0.0002 90.91% 4dexB(1-45) 1e-17 100.0% 2kavA(1-90) 8e-16 25.0% 3g43E(2-66) 4e-10 36.84% 2lcmA(1-28) 2e-05 100.0% PF00520(2-170) 4e-28 38.07% PF00520(6-198) 8e-28 38.22% PF00520(2-198) 3e-27 37.32% PF00520(3-197) 6e-18 35.0% PF00520 1.8e-68 238.1% PF00520 4.5e-59 206.9% PF00520 4.3e-67 233.5% PF00520 4.1e-70 243.5% 1orsC(2-89) 6e-15 10.11% 1orsC(2-124) 5e-12 16.54% 1orsC(2-108) 6e-12 14.29% 1orsC(2-125) 4e-08 16.79% 2e9xC1(1-84) 3e-10 14.29% f.14.1 1.7e-32 112.9% f.14.1 1.1e-33 117.0% f.14.1 6.2e-29 100.5% f.14.1 5.1e-31 107.7%

Sequence

MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTEILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRA
ATKKSRNDLIHAEEGEDRFVDLCAAGSPFARASLKSGKTESSSYFRRKEKMFRFLIRRMV
KAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPR
SYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQN
LRASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVEPGRDGLRGPAGNKSKPEGT
EATEGADPPRRHHRHRDRDKTSASTPAGGEQDRTDCPKAESTETGAREERARPRRSHSKE
APGADTQVRCERSRRHHRRGSPEEATEREPRRHRAHRHAQDSSKEGKEGTAPVLVPKGER
RARHRGPRTGPRETENSEEPTRRHRAKHKVPPTLEPPEREVAEKESNVVEGDKETRNHQP
KEPRCDLEAIAVTGVGSLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQPSDPSTTVHVPV
TLTGPPGEATVVPSANTDLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCLSPTNLLRRF
CHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEMVIKM
IDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDINTIKSLRVLRVLRP
LKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKEL
ERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDAT
YEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERA
CIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYE
YELMLKCLNIVFTSMFSLECILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANN
FINLSFLRLFRAARLIKLCRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQV
FGNIALDDGTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASECG
SDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAA
CGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIR
TALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMI
FDFYKQNKTTRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSATSL
SNGGAIQTQESGIKESLSWGTQRTQDVLYEARAPLERGHSAEIPVGQPGALAVDVQMQNM
TLRGPDGEPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHGTQLCNTVLD
RPPPSQVSHHHHHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAAGSGLPHGEGSTGCRRE
RKQERGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQPKPSLSSHPISPTAALEPGPHPQ
GSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAF
SPGRLSRGLSEHNALLQKEPLSQPLASGSRIGSDPYLGQRLDSEASAHNLPEDTLTFEEA
VATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC

Region:1-2336
Length:2336aa
Label:Full sequence
Reset:click