Input sequence

Protein name Desmocollin-1
Organism Bos taurus Length 893
Disorder content 12.2% ProS content 7.7%
IDEAL NA UniProt Q01107

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 893 1-26 27-111 112-125 126-446 447-452 453-676 677-682 683-692 693-715 716-720 721-757 758-811 812-893 27-111 126-446 453-676 693-715 721-757 812-893 1-26 112-125 683-692 716-720 758-811 10-26 688-692 716-720 758-775 782-794 801-811 134-665 134-665 31-110 244-342 358-432 137-231 245-343 357-462 475-567 120-414 465-568 570-667 34-132 22-165 131-232 228-385 345-463 459-605 570-675 16-25 447-462 710-725 693-715 3q2wA(2-541) 1e-95 38.86% 3q2wA(2-541) 1e-101 38.86% PF08758(8-90) 2e-09 38.55% PF00028(1-91) 1e-07 41.41% PF00028(2-71) 0.0008 37.33% PF00028 1.8e-22 85.3% PF00028 1.2e-33 122.4% PF00028 3.6e-29 107.5% PF00028 3.9e-27 100.8% 2nlzA1(246-531) 6e-36 9.74% 1l3wA4(1-106) 2e-21 32.71% 1l3wA5(1-99) 4e-08 19.8% 1op4A(19-136) 2e-08 20.34% b.1.6 1.1e-14 51.1% b.1.6 2e-14 50.0% b.1.6 1e-32 113.0% b.1.6 1.1e-19 73.0% b.1.6 4.1e-25 86.9% b.1.6 6.6e-28 89.3%

Sequence

MAVASAAPGSIFWKQLLFSLLVLILFCDACQKISLQVPSHLRAEALVGKVNLKECLQSAS
LILSSDPDFRILEDGSIYTTHDLVLSSGKSFSILLSDSQGQGQKEIEIILEAGGKKVPKR
HMKDAVLRRTKRRWAPIPCSLMENSLGPFPQHVQQVQSDAAQNYTIFYSISGPGVDKEPF
NLFFIEKDTGDIFCTRSIDREQYQEFPIYAYATTADGYAPEYPLPLVFKVEDDNDNAPYF
ENKLTVFTVPENCRTGTSVGKVTAIDLDEPDTLHTRLKYKILQQIPNNPRHFTVHPDTGV
ITTTTPLLDREKCDTYKLIMEVRDMGGQPFGLFNTGTITISLEDENDNAPYFTETSYTVE
VEENRIDVEILRMAVHDHDLPNTPHSRAVYQILQGNENGTFKISTDPNTNEAVLCVVKPL
NYEVNRQVVLQIGVLNEAQFAKAVNSKTTTTMCTTVVTVKVKDHDEGPECQPPVKVIQSE
DCLPTGTELLGYKAVDPERGTGEGLRYKKIQDEDNWFEINEYTGDLKTVKVLDRESTFVK
NNQYNVSVIAFDADGRSCTGTLVVFLEDKNDHPPQIKQEELTICRHDKDYVVLEPTDQDG
PDNGPPFQFILDNSASKLWTVETRDGKTAILRGRQDLDYDYYTVPIQIKDRHGASATHIL
PVRVCDCTIPSECRMPSKLSREAALANVFLGKWAILAMVLGSVLLLCILFTCFCVTVKKT
VKKCFPEDVAQQNLIVSNTEGPGEEVMDANIRLPTQTSNVCDTSISVGTLGGQGVKTQQS
FEMVKGGYTLDANKGGGHQTLESVKGVTDTGRYTYSDWHNFTQPRLGEKVYLCGQDEEHK
LCEDYVRSYSYEGKGSVAGSVGCCSDRQEEEGLDFLDHLEPKFRTLAKTCVKK

Region:1-893
Length:893aa
Label:Full sequence
Reset:click