Input sequence

Protein name Protein transport protein sec61 subunit alpha
Organism Schizosaccharomyces pombe Length 479
Disorder content 2.9% ProS content 1.5%
IDEAL NA UniProt P79088

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 479 1-3 4-56 57-60 61-468 469-479 4-56 61-468 1-3 469-479 1-3 469-472 25-464 25-464 76-418 41-75 76-460 11-464 8-466 145-167 420-446 34-56 76-98 119-141 145-167 203-225 245-267 324-346 361-383 416-433 437-459 2wwbA(24-464) 5e-32 25.84% 2wwbA(24-464) 2e-93 26.06% PF00344(1-290) 1e-16 32.2% PF10559(1-35) 7e-11 80.0% PF00344 5.9e-10 -47.7% 1rh5A(4-408) 2e-120 32.09% f.41.1 3.1e-116 397.1%

Sequence

MSDLRFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSS
DPLLWLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKF
LAIIIAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSG
ISLFIATINCENIFWKAFSPTTYHIANGVQFEGAVINFVYVMFTWDNKAAALYQAFFRSG
LTSSQIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPI
MLQSALTSNLFFASRLLFNRFSSNFLVRFLGVWEQTATSGLSYYLSPPASFQDALIDPIH
TLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTA
AWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKEIKGDQYGLPVTPMMQ

Region:1-479
Length:479aa
Label:Full sequence
Reset:click