Input sequence

Protein name Outer membrane usher protein SfmD
Organism EColi Length 867
Disorder content 3.2% ProS content 2.4%
IDEAL NA UniProt P77468

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP SEG:LCR TMHMM:TMhelix 0 867 1-12 13-122 123-126 127-625 626-629 630-644 645-654 655-865 866-867 13-122 127-625 630-644 655-865 1-12 626-629 645-654 866-867 1-5 11-12 626-629 645-654 64-862 64-862 39-839 37-847 136-320 36-164 303-571 412-423 13-35 3rfzB(4-776) 0.0 46.66% 3rfzB(4-776) 7e-93 44.96% PF00577(2-765) 2e-178 47.77% PF00577 0.0 1436.3% 1h7zA(9-186) 4e-35 10.53% 1ze3D1(1-115) 2e-31 35.66% 1tlwA(7-249) 2e-13 8.66%

Sequence

MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERG
NHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFP
ELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPAL
LLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQR
AIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLT
IRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREG
RFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLG
NWGAVSLDVTHARSQLADASRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDV
AYRRMEGYEYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNVSQSLNDFGSLYISGTHQKYW
NTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRE
NALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQA
AYGTLGGGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQT
GILTDWRGYAVMLYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIG
VRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRC
IAHYVLPKQSLQQAVTVISAVCTHPGS

Region:1-867
Length:867aa
Label:Full sequence
Reset:click