Input sequence

Protein name Probable cyclic di-GMP phosphodiesterase PdeD
Organism EColi Length 532
Disorder content 5.6% ProS content 5.6%
IDEAL NA UniProt P76261

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR TMHMM:TMhelix 0 532 1-16 17-513 514-518 519-532 17-513 1-16 519-532 1-16 519-532 273-507 265-511 272-501 265-501 281-503 241-255 17-36 4kieA(16-255) 9e-41 39.67% 4kieA(8-260) 1e-82 36.82% PF00563(3-236) 1e-41 40.0% PF00563 6.3e-106 362.5% 2basA1(12-233) 4e-52 19.74%

Sequence

MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV
LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV
VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ
LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY
LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV
EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA
PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG
TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE
QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR

Region:1-532
Length:532aa
Label:Full sequence
Reset:click