Input sequence

Protein name Endogenous retrovirus group FC1 Env polyprotein
Organism Homo sapiens Length 584
Disorder content 25.5% ProS content 19.7%
IDEAL NA UniProt P60507

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR TMHMM:TMhelix 0 584 1-24 25-28 29-128 129-137 138-188 189-195 196-217 218-267 268-303 304-503 504-517 518-540 541-584 29-128 138-188 218-267 304-503 518-540 1-24 129-137 196-217 268-303 504-517 541-584 1-21 129-137 268-303 504-517 541-558 564-568 573-584 438-499 438-478 258-499 1-574 7-17 428-437 519-537 518-540 4jf3A(25-83) 5e-10 48.39% 1y4mA(13-53) 5e-10 56.1% PF00429(67-323) 2e-18 29.96% PF00429 1.4e-12 -18.5%

Sequence

MARPSPLCLLLLLTLLTPIVPSNSLLTEPPFRWRFYLHETWTQGNRLSTVTLATVDCQPH
GCQAQVTFNFTSFKSVLRGWSNPTICFVYDQTHSNCRDYWVDTNGGCPYAYCRMHVTQLH
TAKKLQHTYRLTSDGRTTYFLTIPDPWDSRWVSGVTGRLYRWPTDSYPVGKLRIFLTYIR
VIPQVLSNLKDQADNIKHQEEVINTLVQSHPKADMVTYDDKAEAGPFSWITLVRHGARLV
NMAGLVNLSHCFLCTALSQPPLVAVPLPQAFNTSGNHTAHPSGVFSEQVPLFRDPLQPQF
PFCYTTPNSSWCNQTYSGSLSNLSAPAGGYFWCNFTLTKHLNISSNNTLSRNLCLPISLV
PRLTLYSEAELSSLVNPPMRQKRAVFPPLVIGVSLTSSLVASGLGTGAIVHFISSSQDLS
IKLQMAIEASAESLASLQRQITSVAKVAMQNRRALDLLTADKGGTCMFLGEECCYYINES
GLVETSLLTLDKIRDGLHRPSSTPNYGGGWWQSPLTTWIIPFISPILIICLLLLIAPCVL
KFIKNRISEVSRVTVNQMLLHPYSRLPTSEDHYDDALTQQEAAR

Region:1-584
Length:584aa
Label:Full sequence
Reset:click