Input sequence

Protein name NPC intracellular cholesterol transporter 1
Organism Sus scrofa Length 1277
Disorder content 5.5% ProS content 4.1%
IDEAL NA UniProt P56941

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1277 1-17 18-291 292-319 320-804 805-811 812-828 829-835 836-970 971-975 976-1264 1265-1277 18-291 320-804 812-828 836-970 976-1264 1-17 292-319 829-835 971-975 1265-1277 1-17 292-308 829-835 971-975 1272-1277 23-247 23-247 572-1252 363-1252 1085-1251 609-785 577-788 1047-1252 10-15 249-259 269-291 353-375 621-643 656-678 683-705 736-758 763-785 1098-1117 1122-1144 1151-1173 1193-1215 1228-1250 3gkhA(1-225) 5e-128 91.11% 3gkhA(1-225) 6e-84 91.11% PF02460(18-610) 2e-124 38.18% PF02460 9.7e-12 -65.6% 1iwgA7(26-198) 1e-21 16.57% 1iwgA7(34-196) 6e-09 11.67% f.35.1 3.5e-21 76.3% f.35.1 7.9e-23 82.1%

Sequence

MSARGPAFGLLLLLLCPVQVFSQSCVWYGECGIASGDKRYNCRYSGPPKPLPEDGYDLVQ
ELCPGFFFGNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELEYYVGETFANAMYNACRDVEAPSSNEKALGLLCGRE
AQACNATNWIEYMFNKDNGQAPFTITPIFSDLPTHGMEPMNNATKGCDESVDEVTGPCSC
QDCSIVCGPKPQPPPPPVPWRILGLDAMYVIMWSSYMAFLIVFFGAFFAVWCYRKRYFVS
EYTPIDGNIAFSVNSSDKGQAFCCDPLGAAFERGLRRLFAQWGAFCVRHPGCVVFFSLAF
IVACSSGLVFIRVTTDPVDLWSAPGSQARREKEYFDTHFGPFFRMEQLIIRATNNQSHIY
HPYPAGADVPFGPPLSRDILHQVLDLQTAIENITASYNNETVTLQDICLAPLSPYNKNCT
ILSVLNYFQNSHSVLDHQVGDFFFVYADYHTHFLYCVRAPASLNDASLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWESEFINFVKNYKNPNLT
ISFMAERSIEDELNRESNSDLFTILISYAIMFLYISIALGHIKSCSRLLVDSKISLGIAG
ILIVLSSVACSLGIFSYIGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKNRLDVVCCVQGAEDGAGVQASESCLFRFFKNSYAPLLLKDWMRPIVIA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSRYLHAGPPVYFVVEEGHNYT
SLKGQNMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWIDDYFDWIKPQSSCCRVY
NSTDQFCNASVVDPTCIRCRPLTSEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYS
SAVNILGNGSGVGATYFMTYHTVLQASADFIDAMQKARLIASNITRTMGLEASSYRVFPY
SVFYVFYEQYLTVIDDTIFNLGVSLGAIFLVTVVLMGCELWATVIMCVTIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTLSTKGSRVDRAEEALAHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAIVLLGATHGLIFLPVLLSYIGPSINKAKSL
ATQERYKGTEREQLLNF

Region:1-1277
Length:1277aa
Label:Full sequence
Reset:click