Input sequence

Protein name 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
Organism EColi Length 433
Disorder content 3.0% ProS content 1.4%
IDEAL NA UniProt P55135

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP 0 433 1-13 14-433 14-433 1-13 1-6 15-431 15-431 162-432 10-68 96-432 75-431 15-74 15-74 75-432 1uwvA(1-406) 0.0 96.88% 1uwvA(1-406) 9e-79 93.76% PF05958(9-259) 1e-42 42.03% PF01938 3.7e-17 67.6% PF05958 1.4e-10 -41.4% 1uwvA2(1-357) 5e-77 96.92% 1uwvA1(1-60) 5e-21 100.0% b.40.4 6.9e-16 56.9% c.66.1 2.7e-94 324.2%

Sequence

MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQ
YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVI
ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACL
GSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILE
TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNF
TLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV
LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT
GHLESMVLFSRVK

Region:1-433
Length:433aa
Label:Full sequence
Reset:click