Input sequence

Protein name Squalene synthase 1
Organism Arabidopsis thaliana Length 410
Disorder content 3.7% ProS content 2.7%
IDEAL NA UniProt P53799

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP TMHMM:TMhelix 0 410 1-29 30-34 35-377 378-389 390-407 408-410 1-29 35-377 390-407 378-389 408-410 378-384 389-389 408-410 40-366 39-367 46-294 44-333 39-367 35-369 390-407 3v66A(8-332) 4e-86 48.02% 3v66A(7-333) 6e-82 47.27% PF00494(2-231) 7e-14 29.57% PF00494 3.8e-127 433.0% 1ezfA(5-321) 3e-89 46.67% a.128.1 2.4e-97 318.1%

Sequence

MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT
ELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMD
QFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
SKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD
KLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGTLA
LCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKTLN
RLEAVQKLCRDAGVLQNRKSYVNDKGQPNSVFIIMVVILLAIVFAYLRAN

Region:1-410
Length:410aa
Label:Full sequence
Reset:click