Input sequence

Protein name Short-wave-sensitive opsin 1
Organism Mus musculus Length 346
Disorder content 10.4% ProS content 2.9%
IDEAL NA UniProt P51491

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 346 1-5 6-233 234-238 239-320 321-346 6-233 239-320 1-5 234-238 321-346 234-238 342-346 6-293 286-309 1-294 50-301 49-301 3-319 16-342 330-343 34-56 69-91 106-128 148-170 197-219 249-271 281-303 1f88A(8-294) 3e-20 25.77% 1fdfA(1-24) 6e-05 75.0% 1f88A(4-295) 3e-51 24.32% PF00001(1-253) 2e-25 28.29% PF00001 1e-68 238.9% 1f88A(6-320) 3e-27 43.57% f.13.1 1.2e-76 255.5%

Sequence

MSGEDDFYLFQNISSVGPWDGPQYHLAPVWAFRLQAAFMGFVFFVGTPLNAIVLVATLHY
KKLRQPLNYILVNVSLGGFLFCIFSVFTVFIASCHGYFLFGRHVCALEAFLGSVAGLVTG
WSLAFLAFERYVVICKPFGSIRFNSKHALMVVLATWIIGIGVSIPPFFGWSRFIPEGLQC
SCGPDWYTVGTKYRSEYYTWFLFIFCFIIPLSLICFSYSQLLRTLRAVAAQQQESATTQK
AEREVSHMVVVMVGSFCLCYVPYAALAMYMVNNRNHGLDLRLVTIPAFFSKSSCVYNPII
YCFMNKQFRACILEMVCRKPMADESDVSGSQKTEVSTVSSSKVGPH

Region:1-346
Length:346aa
Label:Full sequence
Reset:click