Input sequence

Protein name Short-wave-sensitive opsin 1
Organism Bos taurus Length 349
Disorder content 11.5% ProS content 3.4%
IDEAL NA UniProt P51490

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP TMHMM:TMhelix 0 349 1-11 12-236 237-240 241-324 325-349 12-236 241-324 1-11 237-240 325-349 8-11 237-240 346-349 21-348 1-344 53-304 52-304 1-344 1-345 37-59 72-94 109-131 151-173 200-222 252-274 284-306 1f88A(23-337) 3e-19 23.71% 1f88A(1-338) 2e-57 21.9% PF00001(1-253) 3e-25 29.12% PF00001 6.5e-66 229.6% 1f88A(1-338) 5e-28 39.6% f.13.1 1.3e-77 258.8%

Sequence

MSKMSEEEEFLLFKNISLVGPWDGPQYHLAPVWAFHLQAVFMGFVFFVGTPLNATVLVAT
LRYRKLRQPLNYILVNVSLGGFIYCIFSVFIVFITSCYGYFVFGRHVCALEAFLGCTAGL
VTGWSLAFLAFERYIIICKPFGNFRFSSKHALMVVVATWTIGIGVSIPPFFGWSRFVPEG
LQCSCGPDWYTVGTKYYSEYYTWFLFIFCYIVPLSLICFSYSQLLGALRAVAAQQQESAS
TQKAEREVSHMVVVMVGSFCLCYTPYAALAMYIVNNRNHGVDLRLVTIPAFFSKSACVYN
PIIYCFMNKQFRACIMEMVCGKPMTDESELSSSQKTEVSTVSSSQVGPN

Region:1-349
Length:349aa
Label:Full sequence
Reset:click