Input sequence

Protein name Transcription initiation factor IIB-1
Organism Arabidopsis thaliana Length 312
Disorder content 9.0% ProS content 9.0%
IDEAL NA UniProt P48512

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 312 1-52 53-57 58-80 81-98 99-307 308-312 1-52 58-80 99-307 53-57 81-98 308-312 53-57 81-98 308-312 101-298 6-181 6-309 112-183 215-281 6-46 4-47 112-183 213-281 207-310 105-200 5-47 5-51 104-197 206-312 81-92 1c9bA(1-193) 5e-43 48.0% 3k7aM(8-172) 6e-17 30.9% 4v1nM(3-296) 7e-51 25.81% PF00382(1-71) 2e-10 44.44% PF00382(3-71) 2e-05 34.78% PF08271(3-42) 2e-08 60.98% PF08271 3.1e-17 67.9% PF00382 6.7e-18 70.1% PF00382 3.5e-10 44.4% 1c9bA2(2-107) 2e-24 40.57% 1aisB1(2-96) 4e-19 35.42% 1pftA(7-48) 2e-11 39.53% g.41.3 1.2e-12 44.2% a.74.1 9.4e-23 78.9% a.74.1 1.9e-27 88.3%

Sequence

MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG
GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG
LVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK
KEIGRAKDYIVKTLGLEPGQSVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEF
DIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWY
AKEEDLKNLSSP

Region:1-312
Length:312aa
Label:Full sequence
Reset:click