Input sequence

Protein name Ligand-gated ion channel 50
Organism Caenorhabditis elegans Length 491
Disorder content 30.1% ProS content 25.5%
IDEAL NA UniProt P41849

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 491 1-28 29-329 330-333 334-450 451-488 489-491 29-329 451-488 1-28 334-450 489-491 1-28 334-344 368-450 489-491 54-301 52-300 54-209 32-237 244-480 54-236 30-237 237-487 3-14 35-48 119-132 358-365 238-260 265-287 302-324 463-485 4cofA(36-282) 4e-24 23.6% 4x5tA(10-248) 5e-37 18.47% PF02931(24-177) 7e-13 28.48% PF02931 2.9e-69 240.7% PF02932 1.2e-11 49.1% 1i9bA(27-204) 3e-16 13.44% b.96.1 2.2e-48 165.9% f.36.1 9.8e-37 133.0%

Sequence

MRFLLVLQLVFFYFSAATTNSPKKCSRNSINLGKLIDTLLTDYDTHLLPEAEGVNVTIEL
HVQGVSGISEITGDFSLDVMYSEIWQDPRLSFKHLNVCATNITLKSDFRKKIWTPDTCII
NSKSSSIHSSPSENTFVILYENGLVWSNFRLNVKTPCSVNLKMFPFDSLSCEIVLESYSF
NTDEVRLMWHDVPITMMEKVELPDFDLIGWSTDHQRLEYPNGIWDRAKVKFTFARRYGFY
LFQSYFPTSLTVISSWVGFFFDVRSVSARITLGVSSLLALTFQFGNVLRHLPRVSYIKCL
DVWMIFSVIFIFCTLVELAIVCQLNRWERERQIGSKVLGHWLNQIRKTRKKESKADEGGG
GGVGGLLRKRIPVLAQLKAAATDSNSGAATAMTTAIQPPNTNLNSITNSDNSKLVANNFT
SIEHETYAYEKKRGFSHCFQRFVYAICPPDRDWTITSVQVDRCSMIMFPLSFLIFNVVYW
SIYFMKMDRPM

Region:1-491
Length:491aa
Label:Full sequence
Reset:click