Input sequence

Protein name Collagen alpha-1(XVIII) chain
Organism Mus musculus Length 1774
Disorder content 73.6% ProS content 53.6%
IDEAL NA UniProt P39061

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1774 1-150 151-157 158-370 371-395 396-400 401-433 434-441 442-483 484-491 492-671 672-1593 1594-1735 1736-1745 1746-1772 1773-1774 151-157 371-395 401-433 442-483 492-671 1594-1735 1746-1772 1-150 158-370 484-491 672-1593 1736-1745 1773-1774 1-44 69-82 96-104 126-150 188-196 261-275 284-306 319-322 332-345 368-370 672-705 715-724 751-763 785-810 819-893 901-916 923-951 956-1049 1055-1151 1156-1278 1284-1513 1546-1570 1576-1583 1736-1745 1597-1768 1463-1514 1591-1768 1458-1514 508-675 1065-1105 1460-1770 24-219 16-219 364-480 821-879 921-979 983-1042 1069-1128 1207-1265 1271-1330 1458-1774 1591-1768 495-686 384-491 367-486 516-681 1597-1768 6-21 89-98 108-124 295-307 363-383 426-444 699-715 719-734 739-751 789-860 877-895 921-942 951-987 1024-1042 1111-1130 1132-1147 1166-1181 1186-1202 1221-1239 1275-1288 1301-1319 1358-1393 1397-1414 1417-1433 1441-1454 1koeA(1-172) 1e-96 100.0% 3hshA(5-56) 4e-17 78.85% 1bnlA(1-178) 6e-72 85.96% 3hshA(1-56) 7e-17 75.44% 1z78A(20-189) 1e-10 21.91% 2pneA(5-45) 3e-05 43.9% PF06482(1-251) 5e-79 54.34% PF06121(9-202) 2e-38 62.94% PF06121 1.8e-136 464.0% PF01392 3e-42 151.0% PF01391 5.3e-10 43.8% PF01391 1.5e-05 22.7% PF01391 2e-07 35.3% PF01391 1.1e-12 52.8% PF01391 6.9e-06 28.7% PF01391 0.00015 4.1% PF06482 5.6e-198 668.3% 1bnlA(1-178) 6e-91 85.96% 1z78A1(6-200) 1e-18 17.33% 1ijxA(15-125) 2e-10 25.66% a.141.1 6.8e-31 103.2% b.29.1 3.6e-14 43.7% d.169.1 3.3e-78 252.3%

Sequence

MAPDPSRRLCLLLLLLLSCRLVPASADGNSLSPLNPLVWLWPPKTSDSLEGPVSKPQNSS
PVQSTENPTTHVVPQDGLTEQQTTPASSELPPEEEEEEDQKAGQGGSPATPAVPIPLVAP
AASPDMKEENVAGVGAKILNVAQGIRSFVQLWDEDSTIGHSAGTEVPDSSIPTVLPSPAE
LSSAPQGSKTTLWLSSAIPSSPDAQTTEAGTLAVPTQLPPFQSNLQAPLGRPSAPPDFPG
RAFLSSSTDQGSSWGNQEPPRQPQHLEGKGFLPMTARSSQQHRHSDVHSDIHGHVPLLPL
VTGPLVTASLSVHGLLSVPSSDPSGQLSQVAALPGFPGTWVSHVAPSSGTGLSNDSALAG
NGSLTSTSRCLPLPPTLTLCSRLGIGHFWLPNHLHHTDSVEVEATVQAWGRFLHTNCHPF
LAWFFCLLLAPSCGPGPPPPLPPCRQFCEALEDECWNYLAGDRLPVVCASLPSQEDGYCV
FIGPAAENVAEEVGLLQLLGDPLPEKISQIDDPHVGPAYIFGPDSNSGQVAQYHFPKLFF
RDFSLLFHVRPATEAAGVLFAITDAAQVVVSLGVKLSEVRDGQQNISLLYTEPGASQTQT
GASFRLPAFVGQWTHFALSVDGGSVALYVDCEEFQRVPFARASQGLELERGAGLFVGQAG
TADPDKFQGMISELKVRKTPRVSPVHCLDEEDDDEDRASGDFGSGFEESSKSHKEDTSLL
PGLPQPPPVTSPPLAGGSTTEDPRTEETEEDAAVDSIGAETLPGTGSSGAWDEAIQNPGR
GLIKGGMKGQKGEPGAQGPPGPAGPQGPAGPVVQSPNSQPVPGAQGPPGPQGPPGKDGTP
GRDGEPGDPGEDGRPGDTGPQGFPGTPGDVGPKGEKGDPGIGPRGPPGPPGPPGPSFRQD
KLTFIDMEGSGFSGDIESLRGPRGFPGPPGPPGVPGLPGEPGRFGINGSYAPGPAGLPGV
PGKEGPPGFPGPPGPPGPPGKEGPPGVAGQKGSVGDVGIPGPKGSKGDLGPIGMPGKSGL
AGSPGPVGPPGPPGPPGPPGPGFAAGFDDMEGSGIPLWTTARSSDGLQGPPGSPGLKGDP
GVAGLPGAKGEVGADGAQGIPGPPGREGAAGSPGPKGEKGMPGEKGNPGKDGVGRPGLPG
PPGPPGPVIYVSSEDKAIVSTPGPEGKPGYAGFPGPAGPKGDLGSKGEQGLPGPKGEKGE
PGTIFSPDGRALGHPQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGTNGLKGEKG
EPGDASLGFSMRGLPGPPGPPGPPGPPGMPIYDSNAFVESGRPGLPGQQGVQGPSGPKGD
KGEVGPPGPPGQFPIDLFHLEAEMKGDKGDRGDAGQKGERGEPGAPGGGFFSSSVPGPPG
PPGYPGIPGPKGESIRGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTVSV
PGPPGPPGPPGPPGAMGASAGQVRIWATYQTMLDKIREVPEGWLIFVAEREELYVRVRNG
FRKVLLEARTALPRGTGNEVAALQPPLVQLHEGSPYTRREYSYSTARPWRADDILANPPR
LPDRQPYPGVPHHHSSYVHLPPARPTLSLAHTHQDFQPVLHLVALNTPLSGGMRGIRGAD
FQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSLFSGS
QGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQAS
SLLSGRLLEQKAASCHNSYIVLCIENSFMTSFSK

Region:1-1774
Length:1774aa
Label:Full sequence
Reset:click