Input sequence

Protein name Nonsense-mediated mRNA decay protein 2
Organism Saccharomyces cerevisiae Length 1089
Disorder content 24.5% ProS content 10.4%
IDEAL NA UniProt P38798

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1089 1-6 7-24 25-28 29-122 123-129 130-307 308-373 374-561 562-571 572-813 814-947 948-982 983-1043 1044-1089 7-24 29-122 130-307 374-561 572-813 948-982 1044-1089 1-6 308-373 814-947 983-1043 1-6 325-359 872-883 891-898 903-925 983-1003 1036-1043 1-310 575-807 337-553 1-311 574-811 337-560 977-1084 34-245 373-561 578-818 874-1085 574-782 389-557 374-561 574-819 843-866 884-936 955-976 1010-1025 243-277 523-550 948-982 4lunU(1-306) 5e-171 98.71% 1uw4B(3-236) 1e-23 28.81% 4cekA(2-233) 8e-13 25.11% 4lunU(1-307) 7e-103 98.39% 1uw4B(2-240) 3e-43 27.42% 4cekA(2-240) 7e-33 22.41% PF04050(73-175) 2e-06 36.36% PF02854 1.1e-29 109.3% PF02854 6.2e-46 163.2% PF02854 1.5e-40 145.4% PF04050 0.0002 -8.7% 1uw4B(2-216) 1e-61 28.64% 1hu3A(24-197) 1e-17 14.77% a.118.1 6.1e-48 154.6% a.118.1 1.4e-56 182.7%

Sequence

MDDGRKKELHDLNTRAWNGEEVFPLKSKKLDSSIKRNTGFIKKLKKGFVKGSESSLLKDL
SEASLEKYLSEIIVTVTECLLNVLNKNDDVIAAVEIISGLHQRFNGRFTSPLLGAFLQAF
ENPSVDIESERDELQRITRVKGNLRVFTELYLVGVFRTLDDIESKDAIPNFLQKKTGRKD
PLLFSILREILNYKFKLGFTTTIATAFIKKFAPLFRDDDNSWDDLIYDSKLKGALQSLFK
NFIDATFARATELHKKVNKLQREHQKCQIRTGKLRDEYVEEYDKLLPIFIRFKTSAITLG
EFFKLEIPELEGASNDDLKETASPMITNQILPPNQRLWENEDTRKFYEILPDISKTVEES
QSSKTEKDSNVNSKNINLFFTDLEMADCKDIIDDLSNRYWSSYLDNKATRNRILKFFMET
QDWSKLPVYSRFIATNSKYMPEIVSEFINYLDNGFRSQLHSNKINVKNIIFFSEMIKFQL
IPSFMIFHKIRTLIMYMQVPNNVEILTVLLEHSGKFLLNKPEYKELMEKMVQLIKDKKND
RQLNMNMKSALENIITLLYPPSVKSLNVTVKTITPEQQFYRILIRSELSSLDFKHIVKLV
RKAHWDDVAIQKVLFSLFSKPHKISYQNIPLLTKVLGGLYSYRRDFVIRCIDQVLENIER
GLEINDYGQNMHRISNVRYLTEIFNFEMIKSDVLLDTIYHIIRFGHINNQPNPFYLNYSD
PPDNYFRIQLVTTILLNINRTPAAFTKKCKLLLRFFEYYTFIKEQPLPKETEFRVSSTFK
KYENIFGNTKFERSENLVESASRLESLLKSLNAIKSKDDRVKGSSASIHNGKESAVPIES
ITEDDEDEDDENDDGVDLLGEDEDAEISTPNTESAPGKHQAKQDESEDEDDEDDDEDDDD
DDDDDDDDGEEGDEDDDEDDDDEDDDDEEEEDSDSDLEYGGDLDADRDIEMKRMYEEYER
KLKDEEERKAEEELERQFQKMMQESIDARKSEKVVASKIPVISKPVSVQKPLLLKKSEEP
SSSKETYEELSKPKKIAFTFLTKSGKKTQSRILQLPTDVKFVSDVLEEEEKLKTERNKIK
KIVLKRSFD

Region:1-1089
Length:1089aa
Label:Full sequence
Reset:click