Input sequence

Protein name Antigen peptide transporter 1
Organism Rattus norvegicus Length 725
Disorder content 6.6% ProS content 4.7%
IDEAL NA UniProt P36370

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 725 1-6 7-61 62-67 68-90 91-116 117-139 140-145 146-312 313-314 315-723 724-725 7-61 68-90 117-139 146-312 315-723 1-6 62-67 91-116 140-145 313-314 724-725 1-6 62-67 91-96 103-116 313-314 469-719 236-719 181-430 522-648 164-435 508-695 479-696 149-463 369-576 152-463 469-719 2-25 52-68 70-88 164-176 304-322 7-29 39-61 68-90 117-139 164-186 206-228 290-312 2ixeA(1-251) 2e-141 99.6% 3g5uA(694-1180) 4e-136 31.7% PF00664(18-269) 5e-16 30.86% PF00005(1-123) 2e-14 38.13% PF00664 1.6e-66 231.6% PF00005 3.8e-64 223.7% 1sgwA(2-199) 1e-38 18.35% 2hydA2(1-322) 1e-38 18.32% 1qhdA1(10-211) 3e-22 8.17% f.37.1 1.1e-66 202.0% c.37.1 9.5e-67 222.4%

Sequence

MAAHAWPTAALLLLLVDWLLLRPVLPGIFSLLVPEVPLLRVWAVGLSRWAILGLGVRGVL
GVTAGARGWLAALQPLVAALGLALPGLASFRKLSAWGALREGDNAGLLHWNSRLDAFVLS
YVAALPAAALWHKLGGFWAPSGHKGAGDMLCRMLGFLDSKKGRLHLVLVLLILSCLGEMA
IPFFTGRITDWILQDKTAPSFARNMWLMCILTIASTVLEFAGDGIYNITMGHMHSRVHGE
VFRAVLHQETGFFLKNPTGSITSRVTEDTSNVCESISDKLNLFLWYLGRGLCLLAFMIWG
SFYLTVVTLLSLPLLFLLPRRLGKVYQSLAVKVQESLAKSTQVALEALSAMPTVRSFANE
EGEAQKFRQKLEEMKPLNKKEALAYVTEVWTMSVSGMLLKVGILYLGGQLVVRGAVSSGN
LVSFVLYQLQFTRAVEVLLSIYPSMQKSVGASEKIFEYLDRTPCSPLSGSLAPLNMKGLV
KFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVL
LDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHD
FISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQR
LLYESPEWASRTVLLITQQLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSMVEAL
AAPSD

Region:1-725
Length:725aa
Label:Full sequence
Reset:click