Input sequence

Protein name Low-density lipoprotein receptor
Organism Rattus norvegicus Length 879
Disorder content 3.1% ProS content 3.1%
IDEAL NA UniProt P35952

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 879 1-6 7-52 53-66 67-189 190-194 195-714 715-722 723-872 873-879 7-52 67-189 195-714 723-872 1-6 53-66 873-879 1-6 53-66 873-879 65-714 25-104 65-714 25-104 529-569 198-232 26-58 107-143 67-104 236-271 25-63 66-104 107-143 146-184 196-232 235-271 275-314 319-353 355-393 440-484 486-527 529-571 573-616 617-657 401-664 664-712 26-74 108-158 198-248 66-117 279-319 318-358 236-272 355-398 24-64 64-104 107-143 146-195 189-235 232-271 274-317 399-661 661-713 6-23 167-178 779-791 806-828 1n7dA(1-639) 0.0 79.85% 1f5yA(6-85) 3e-35 75.0% 1n7dA(1-639) 4e-75 78.0% 1f5yA(6-85) 6e-11 75.0% PF00058(1-40) 7e-06 46.34% PF00057(3-37) 4e-05 62.86% PF00057(2-34) 5e-05 60.61% PF00057(1-37) 8e-05 54.05% PF00057(2-37) 0.0005 57.89% PF00057(2-37) 0.0005 61.11% PF00057 9.1e-16 63.0% PF00057 6.1e-17 66.9% PF00057 1.1e-16 66.1% PF00057 2.9e-21 81.3% PF00057 7.2e-19 73.3% PF00057 4.8e-17 67.2% PF00057 2.9e-15 61.3% PF00008 9e-08 36.4% PF07645 1.3e-08 39.2% PF00058 5.9e-16 63.6% PF00058 4.5e-15 60.7% PF00058 7.4e-16 63.3% PF00058 3.7e-14 57.7% PF00058 6.6e-09 40.2% 1npeA(3-256) 3e-83 28.41% 1ijqA2(1-49) 5e-11 85.71% 1n7dA7(2-50) 8e-10 40.82% 1n7dA7(2-50) 7e-08 39.22% 1n7dA7(3-50) 2e-07 39.22% 1n7dA7(1-48) 1e-06 38.46% 1n7dA7(4-44) 0.0001 36.59% 1adxA(1-40) 1e-08 36.59% 1j8eA(4-40) 2e-05 37.84% 1n7dA3(1-44) 0.0004 77.27% g.12.1 1.1e-10 36.8% g.12.1 5.6e-12 44.6% g.12.1 2.8e-11 38.1% g.12.1 8.3e-12 39.9% g.12.1 6.7e-12 44.3% g.12.1 1.7e-10 38.4% g.12.1 5.6e-09 34.4% b.68.5 4.8e-80 263.2% g.3.11 2.9e-10 30.8%

Sequence

MSTADLMLRWAIALLLAAAGVAAEDSCGKNEFQCRDGKCIVSKWVCDGSRECPDGSDESP
ETCMSVTCRSGEFSCGGRVSRCIPDSWRCDGRTDCENGSDELDCSPKTCSLDEFRCQDGK
CISRQFVCDQDWDCLDGSDEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEW
PQNCGAEDTAAEVVSSPCSSLEFHCGSSECIHRSWVCDGAADCKDKSDEENCAVTTCRPD
EFQCADGSCIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSA
RDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQ
EPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVGSIGFLLFTNRHEVRKMTLDRSEY
TSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDGLA
VDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPA
KIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILE
DEKQLAHPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKNLMSPEDIVLFHNVTQ
PRGVNWCEATVLPNGGCQYMCLPAPQISAHSPKFTCACPDGMLLAKDMRSCLPEVDTVPT
TQGTSTIGPVVTTSAAVSLKRKEDPSATRHKEDPSATRHNEDPSATSTSRQPGDTPELST
VESVTVSSQVQGDMAGRGDEVQRHGVGFLSIFLPIALVALLVFGAILLWRNWRLRNINSI
NFDNPVYQKTTEDEIHICRSQDGYTYPSRQMVSLEDDVA

Region:1-879
Length:879aa
Label:Full sequence
Reset:click