Input sequence

Protein name DNA-directed RNA polymerase II subunit rpb1
Organism Dictyostelium discoideum Length 1727
Disorder content 17.4% ProS content 10.1%
IDEAL NA UniProt P35084

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1727 1-154 155-169 170-257 258-259 260-263 264-325 326-342 343-600 601-604 605-1262 1263-1271 1272-1475 1476-1727 1-154 170-257 264-325 343-600 605-1262 1272-1475 155-169 260-263 326-342 601-604 1263-1271 1476-1727 155-169 326-342 601-604 1502-1526 1531-1535 1544-1559 1580-1594 1621-1647 1659-1665 1670-1713 5-1505 5-1519 347-511 18-344 882-1075 1160-1286 716-808 516-677 1075-1138 816-883 12-345 347-512 515-678 703-809 816-1416 8-1463 3-1468 243-253 1550-1713 1716-1727 3h0gA(5-1485) 0.0 58.77% 3h0gA(5-1493) 0.0 58.01% PF00623(1-165) 9e-53 56.97% PF04997(5-326) 1e-44 37.91% PF04992(1-185) 1e-44 45.36% PF04990(1-130) 9e-42 63.08% PF05000(14-106) 2e-26 60.22% PF04983(2-144) 8e-25 39.26% PF04998(142-205) 2e-18 67.19% PF04998(1-68) 1e-14 50.0% PF04997 4.5e-166 562.3% PF00623 6.5e-116 395.7% PF04983 2.8e-83 287.2% PF05000 8.3e-57 199.3% PF04998 1.9e-160 543.6% 1i3qA(6-1414) 0.0 54.1% e.29.1 0.0 1767.3%

Sequence

MAAFFPPSSAELRKVKRVQFGILSPDEIRNMSVARVEHPETYENGKPKAGGLLDPAMGTI
DKTQRCQTCSGTMAECPGHFGHIELAKPVFHIGFIDTVLKILRCVCYHCSKLLTDTNEHS
FRQALKIRNQKHRLNAVVDCCKNKKVCAIGGEEEEEHDLSKTDEELDKPVKHGGCGNVLP
KITKEDLKIIVEFKDVTDESIEKKSVLSAERVLNILKRIKDEDSRAMGINPDWARADWMI
ATVLPVPPPPVRPSIMMDTSTRGEDDLTHKLADIVKANRELQRQEKNGAPAHIIAEATQF
LQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGKEGRIRGNLMGKRVDFSARTVITA
DPNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNGPSEHPGAKYIIREDGTRFDL
RFVKKVSDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVT
SPYNADFDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLFT
KRDCFMEKDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIPDINLIRFTSTHN
DKEPNECSAGDTRVIIERGELLAGILCKRSLGAANGSIIHVVMNEHGHDTCRLFIDQTQT
VVNHWLINRGFTMGIGDTIADSATMAKVTLTISSAKNQVKELIIKAQNKQFECQPGKSVI
ETFEQKVNQVLNKARDTAGSSAQDSLSEDNNLKAMVTAGSKGSFINISQMMACVGQQNVE
GKRIPFGFQSRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKT
SETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGIDGCFVENQSIDSLRKDNT
ELERMYRHQVDKPDYGDGWMDPLVIEHVRNDSLTRDTLEKEFERIKSDRSLLRNEIIPSG
EANWPLPVNLRRLINNAQKLFNIDIRRVSDLNPAVVVLEIEKLVARLKIIATADTTEDDE
NFNRAWAEVYFNATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIESKFLQALAHPG
EMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINIAKQVKTPSLTIYLK
PHMARDMDRAKIVKSQLEYTTLANVTSATEIYYDPDPQNTIISEDAEFVNSYFELPDEEI
DVHSMSPWLLRIELDRGMVTDKKLTMADITQCVVRDFGLSLNCIFSDDNAEKLILRIRMV
ESQETKGTDNDDDDQFLRRIESNMLSEMVLRGIKGIKKVFMRTDDKIPKVTENGGFGVRE
EWILDTDGVSLLEVMSHPDVDHTRTTSNDIVEIIQVLGIEAVRNALLKELRAVISFDGSY
VNYRHLAILADVMTYRGHLMAITRHGINRVETGPLMRCSFEETVEILMDAAMFSETDDVK
GVTENIILGQLPPLGTGSFEVFLNQDMIKNAHSIALPEPSNVSYPDTPGSQTPSYSYGDG
STTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKSYGSSYQYFPQSPTYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPTFTNKYNYQPNNKKK

Region:1-1727
Length:1727aa
Label:Full sequence
Reset:click