Input sequence

Protein name Probable ATP-dependent RNA helicase DDX55 homolog
Organism Caenorhabditis elegans Length 578
Disorder content 9.0% ProS content 4.2%
IDEAL NA UniProt P34640

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 578 1-7 8-477 478-481 482-509 510-536 537-564 565-578 8-477 482-509 537-564 1-7 478-481 510-536 565-578 478-481 515-520 565-578 26-366 8-478 43-199 289-352 33-207 278-354 11-222 232-414 29-374 506-523 525-554 482-509 537-564 2z0mA(11-323) 1e-36 29.62% 3i5xA(15-503) 3e-88 22.8% PF00270(11-160) 2e-26 41.14% PF00271(11-74) 2e-08 39.06% PF00270 6.4e-53 186.4% PF00271 8.3e-23 86.4% 1fuuA(11-215) 5e-26 24.3% 1gm5A4(2-190) 7e-18 16.75% c.37.1 1.6e-48 156.0%

Sequence

MTSKVGPVALKTFREKLGPELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKT
LAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKV
DKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHM
REILSCIPKQRRTGLFSATQVKEEDDLMVFGLRNAKQVKVAQERNSAAPSTLKNYYVECR
ADEKTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRAS
QIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREGNAL
ILIASEQLAYVNFLDNHEKVKLDEIKVPTNNSRKSEELRQKMIKIQVSDRAILEAGTRAF
VSHVESYAKHDCHLICSLDDLNVVGLANSYALLRLPKMRELSQRKDLDMFDRSAIETSEI
KYADVKLEANRETVMKEKHEKKVETLAAKDKKRREKEARKLKKMGGRFRNGGGTGRKAEE
KKALKRKAEEEDDAQNDIRLLKRIKRGKLSKKEIKDVL

Region:1-578
Length:578aa
Label:Full sequence
Reset:click