Input sequence

Protein name 72 kDa type IV collagenase
Organism Rattus norvegicus Length 662
Disorder content 5.0% ProS content 2.4%
IDEAL NA UniProt P33436

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 662 1-6 7-29 30-42 43-62 63-69 70-452 453-466 467-662 7-29 43-62 70-452 467-662 1-6 30-42 453-466 4-6 30-42 31-662 32-445 469-662 129-218 380-445 349-390 233-274 291-332 570-610 43-101 118-446 477-520 522-565 570-617 619-662 469-662 117-218 378-445 217-277 339-393 277-334 31-107 108-452 463-662 8-25 446-468 7-29 1ck7A(1-619) 0.0 94.62% 1eakA(1-414) 4e-98 97.1% 1genA(7-200) 4e-32 97.42% PF00413(2-88) 7e-32 67.78% PF00413(76-145) 6e-20 65.28% PF00040(1-42) 4e-14 71.43% PF00040(1-42) 2e-13 66.67% PF00040(1-42) 2e-11 61.9% PF00045(1-38) 1e-07 63.41% PF01471 1.6e-05 28.9% PF00413 5.2e-96 329.5% PF00045 1e-09 42.9% PF00045 2e-14 58.5% PF00045 1.6e-20 78.8% PF00045 5.8e-07 33.7% 1fblA1(5-195) 1e-52 34.87% 1a85A(2-103) 1e-36 51.96% 1a85A(89-157) 8e-19 51.43% 1ck7A3(1-61) 1e-22 96.72% 1ck7A3(7-61) 5e-21 52.73% 1ck7A3(3-60) 5e-20 53.45% 1ck7A6(1-77) 7e-18 98.7% d.92.1 6.2e-59 193.0% b.66.1 1.8e-75 239.5%

Sequence

MEARLVWGVLVGPLRVLCVLCCLLGHAIAAPSPIIKFPGDVSPKTDKELAVQYLNTFYGC
PKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWD
KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRIHDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFN
GREYSSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNGDGQPCKFPFRFQGT
SYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKY
ESCTSAGRSDGKVWCATTTNYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGAL
MAPIYTYTKNFRLSNDDIKGIQELYGPSPDADTDTGTGPTPTLGPVTPEICKQDIVFDGI
AQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN
EYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIFSGDKFWRYNEVKKKM
DPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWL
GC

Region:1-662
Length:662aa
Label:Full sequence
Reset:click