Input sequence

Protein name MHC class II transactivator
Organism Homo sapiens Length 1130
Disorder content 24.4% ProS content 13.5%
IDEAL NA UniProt P33076

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1130 1-25 26-56 57-58 59-72 73-126 127-332 333-370 371-397 398-796 797-801 802-894 895-898 899-1130 26-56 73-126 333-370 398-796 802-894 899-1130 1-25 59-72 127-332 371-397 895-898 1-25 59-72 127-142 167-170 205-211 227-233 240-256 274-292 303-313 325-332 371-390 895-898 984-1105 934-1027 399-582 48-119 414-580 414-585 976-1105 528-641 396-438 860-1123 26-38 369-382 595-613 656-667 770-781 806-819 1035-1051 4r5dA(286-405) 4e-14 30.89% 4r5dA(350-440) 3e-07 25.53% 4kxfB(44-221) 4e-08 16.58% 4ei0A(161-236) 0.0005 21.05% PF05729(1-156) 3e-12 35.29% PF05729 4.3e-72 250.1% 1pgvA(7-136) 5e-12 12.03% 2j6bA1(3-101) 6e-11 10.34% c.37.1 0.00064 11.4% c.10.1 4.1e-28 85.5%

Sequence

MRCLAPRPAGSYLSEPQGSSQCATMELGPLEGGYLELLNSDADPLCLYHFYDQMDLAGEE
EIELYSEPDTDTINCDQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFK
HIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPPTVVTGSLLVRPVSDCS
TLPCLPLPALFNQEPASGQMRLEKTDQIPMPFSSSSLSCLNLPEGPIQFVPTISTLPHGL
WQISEAGTGVSSIFIYHGEVPQASQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSM
PEPALTSRANMTEHKTSPTQCPAAGEVSNKLPKWPEPVEQFYRSLQDTYGAEPAGPDGIL
VEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEVLLAAKEHRRPRETRVIAVLG
KAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAA
DEVFSHILKRPDRVLLILDGFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRG
CTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYFESSGMTEHQDRALTLLRD
RPLLLSHSHSPTLCRAVCQLSEALLELGEDAKLPSTLTGLYVGLLGRAALDSPPGALAEL
AKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHPPRAAESELAFPSFLLQCFLGAL
WLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQPPARCLGALLGPSAAA
SVDRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQHVVQELPGRLSFLGTRL
TPPDAHVLGKALEAAGQDFSLDLRSTGICPSGLGSLVGLSCVTRFRAALSDTVALWESLQ
QHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKL
EFALGPVSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETL
NLSQNNITDLGAYKLAEALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQ
YNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR

Region:1-1130
Length:1130aa
Label:Full sequence
Reset:click