Input sequence

Protein name Probable cyclic di-GMP phosphodiesterase PdeC
Organism EColi Length 528
Disorder content 3.4% ProS content 1.9%
IDEAL NA UniProt P32701

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR TMHMM:TMhelix 0 528 1-9 10-519 520-528 10-519 1-9 520-528 4-9 525-528 275-512 275-516 274-505 267-506 275-518 247-269 10-32 239-261 4rniA(8-247) 1e-38 37.92% 4kieA(16-260) 2e-82 30.89% PF00563(3-235) 6e-50 42.92% PF00563 9e-119 405.2% 2basA1(4-243) 7e-57 20.65%

Sequence

MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQA
DLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAP
ADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTV
TKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFY
NHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI
GAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYLATHADRYVSI
NLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVA
IDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEG
VETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ

Region:1-528
Length:528aa
Label:Full sequence
Reset:click