Input sequence

Protein name Multidrug efflux pump subunit AcrB
Organism EColi Length 1049
Disorder content 3.1% ProS content 1.0%
IDEAL NA UniProt P31224

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1049 1-501 502-509 510-532 533-539 540-1032 1033-1049 1-501 510-532 540-1032 502-509 533-539 1033-1049 533-539 1033-1035 1-1044 1-1044 1-997 1-1030 321-498 34-214 818-1001 567-673 762-859 182-273 228-330 38-134 135-330 296-498 567-673 674-859 807-1036 15-28 293-305 1002-1016 1020-1033 10-32 340-359 369-391 438-460 470-492 542-564 873-892 899-921 926-948 975-997 1007-1029 4dx5A(1-1044) 0.0 75.77% 4dx5A(1-1044) 0.0 75.77% PF00873(1-981) 0.0 42.77% PF00873 0.0 2187.3% 1iwgA7(22-199) 6e-42 96.07% 1e6vB2(12-180) 5e-34 10.99% 1iwgA8(3-187) 8e-30 74.05% 1iwgA3(1-107) 3e-28 100.0% 1iwgA4(2-97) 8e-26 54.08% 1iwgA5(1-92) 9e-24 100.0% 1iwgA2(2-104) 5e-17 60.58% d.58.44 3.9e-30 110.6% d.58.44 8.8e-27 92.2% f.35.1 5.1e-49 173.8% d.58.44 1.7e-36 130.1% d.58.44 7.1e-30 105.2% f.35.1 1.5e-45 155.2%

Sequence

MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT
VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ
EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS
QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL
TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL
DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR
YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT
KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD
AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG
LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR
MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA
MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS
VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL
IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF
FVPVFFVVVRRRFSRKNEDIEHSHTVDHH

Region:1-1049
Length:1049aa
Label:Full sequence
Reset:click