Input sequence

Protein name DNA topoisomerase 1 alpha
Organism Arabidopsis thaliana Length 916
Disorder content 44.4% ProS content 11.6%
IDEAL NA UniProt P30181

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 916 1-363 364-816 817-860 861-916 364-816 861-916 1-363 817-860 1-28 123-132 172-178 293-298 353-363 817-860 371-780 861-908 371-780 861-913 371-581 585-796 369-581 584-818 371-581 585-792 869-913 367-583 583-914 34-47 77-93 287-293 302-311 346-370 472-487 797-807 460-487 782-816 2b9sA(20-426) 2e-122 54.26% 2b9sB(1-48) 6e-11 58.33% 2b9sA(20-426) 3e-129 54.26% 2b9sB(1-52) 6e-15 54.72% PF02919(3-215) 5e-60 65.58% PF01028(3-216) 5e-58 56.07% PF02919 4.7e-157 532.3% PF01028 1.2e-142 484.5% 1a31A2(3-215) 4e-95 46.98% 1a31A1(3-220) 1e-75 49.08% 1a31A1(197-242) 3e-14 65.22% e.15.1 2e-98 337.9% d.163.1 1.8e-86 290.7%

Sequence

MGTETVSKPVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMRSP
VTSPNGTTPSNKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQLQKDQSECKIEHE
DSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGDRPLDRASRIIKDESDDETPISSMF
RKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNEVPNGKVLGKRPLEKNSSADQSSLK
KAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMKAKQLSTREDGTDDDDDDDVPISKRF
KSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVVSPRSRAMTKNTKKVTKDSKYSTSSKS
SPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILYKGKPVDLTIEQEEVATMFAVMRETDY
YTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTPIYEWHLEEKEKKKQMSTEEKKALKEE
KMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGRGEHPKMGKLKKRIHPCEITLNIGKGA
PIPECPIAGERWKEVKHDNTVTWLAFWADPINPKEFKYVFLGAGSSLKGLSDKEKYEKAR
NLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
GNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLN
AHLKELVPGLTAKVFRTYNASITLDEMLSQETKDGDVTQKIVVYQKANKEVAIICNHQRT
VSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKKGKPPLEGSDGKKIRSLEPNAWEKKI
AQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFTKSLLEK
FAWAMDVEPEYRFSRR

Region:1-916
Length:916aa
Label:Full sequence
Reset:click