Input sequence

Protein name Outer membrane usher protein FimD
Organism EColi Length 878
Disorder content 4.3% ProS content 2.3%
IDEAL NA UniProt P30130

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP SEG:LCR TMHMM:TMhelix 0 878 1-20 21-127 128-131 132-197 198-201 202-234 235-238 239-608 609-613 614-656 657-666 667-878 21-127 132-197 202-234 239-608 614-656 667-878 1-20 198-201 235-238 657-666 1-6 198-201 657-666 71-878 71-878 49-861 47-862 139-332 46-170 315-584 653-669 765-779 21-43 3rfzB(1-777) 0.0 96.04% 3rfzB(1-777) 5e-125 95.79% PF00577(2-770) 0.0 50.18% PF00577 0.0 1549.0% 1h7zA(7-186) 2e-43 10.82% 1ze3D1(1-116) 9e-35 92.0% 1tlwA(7-247) 1e-21 11.55%

Sequence

MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLVVACAFAAQAPLSSADLYFNPRFLADDPQA
VADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLN
TASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDP
GINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSK
NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPV
IHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTV
PYSSVPLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGGTQLADRY
RAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYR
YSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRT
STLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNI
PFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGD
GNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVL
VKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVP
TRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLA
GKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR

Region:1-878
Length:878aa
Label:Full sequence
Reset:click