Input sequence

Protein name cGMP-gated cation channel alpha-1
Organism Homo sapiens Length 690
Disorder content 29.1% ProS content 19.6%
IDEAL NA UniProt P29973

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 690 1-123 124-612 613-690 124-612 1-123 613-690 1-47 80-109 115-121 622-669 688-690 404-597 623-677 280-535 495-596 623-677 498-587 202-396 497-590 404-605 274-401 159-405 404-603 40-58 101-154 357-362 124-151 300-322 375-397 4d7sA(1-188) 9e-33 29.9% 3swfA(2-56) 2e-22 96.36% 16vpA(53-310) 2e-37 7.36% 4chvA(245-341) 3e-25 24.3% 3swfA(2-56) 7e-20 96.36% PF00027(2-88) 3e-07 34.41% PF00520 2.5e-29 108.1% PF00027 3.1e-21 81.2% 1q3eA(1-192) 3e-31 30.2% 1p7bA2(5-115) 3e-13 10.08% f.14.1 3.9e-38 132.5% b.82.3 8.3e-45 156.0%

Sequence

MKLSMKNNIINTQQSFVTMPNVIVPDIEKEIRRMENGACSSFSEDDDSASTSEESENENP
HARGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQEPEEKKKKKKEKKSKSDDKN
ENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNW
TMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMFVRTRTGYLEQGLLVKEELKLINKY
KSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYPNIFRI
SNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTL
TTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQY
MHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIF
ADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSD
GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGK
QILMKDGLLDLNIANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLT
KVEKFLKPLIDTEFSSIEGPGAESGPIDST

Region:1-690
Length:690aa
Label:Full sequence
Reset:click