Input sequence

Protein name Vascular cell adhesion protein 1
Organism Rattus norvegicus Length 739
Disorder content 0.8% ProS content 0.8%
IDEAL NA UniProt P29534

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 739 1-1 2-120 121-124 125-226 227-233 234-316 317-320 321-408 409-413 414-605 606-609 610-734 735-739 2-120 125-226 234-316 321-408 414-605 610-734 1-1 735-739 1-1 735-739 25-223 313-511 239-383 533-686 29-597 532-686 25-112 133-221 239-293 313-400 421-509 527-581 129-401 26-114 604-687 561-680 532-583 23-114 115-223 215-310 311-402 403-511 503-598 596-688 518-530 699-721 1vcaA(1-199) 1e-82 73.87% 1vcaA(1-199) 1e-66 59.3% 1cs6A(222-363) 4e-12 29.66% 2xy1A(25-192) 1e-08 27.49% 3b43A(8-568) 5e-46 18.39% 2xy1A(24-192) 1e-22 26.86% PF07679 1.5e-10 45.6% PF05790 8.7e-37 132.8% PF00047 1.5e-06 32.4% PF07679 2.5e-12 51.6% PF05790 1.3e-36 132.3% PF00047 5.1e-08 37.2% 2cb2A1(25-305) 2e-11 10.49% 1ij9A2(3-90) 1e-07 71.91% 1fhgA(10-101) 3e-08 18.48% 1aq3A(2-124) 5e-08 11.11% 1xiwB(14-56) 2e-05 21.15% b.1.1 2.2e-15 49.1% b.1.1 5.3e-22 69.0% b.1.1 3.9e-19 55.7% b.1.1 2.7e-17 55.1% b.1.1 4.6e-21 66.1% b.1.1 8.3e-19 54.8% b.1.1 2.6e-14 48.0%

Sequence

MPVKMVAIFGASTVLWILFAVSQAFKIEISPEYKTLAQIGDSMLLTCSTTGCESPSFSWR
TQIDSPLNGKVKTEGAKSVLTMDPVSFENEHSYLCTATCNSGKLERGIQVDIYSFPKDPE
IQFSGPLEVGKPVMVKCLAPDVYPIDRLEIELFKGDRLMKKQDFVDEMAKKSLETKSLEV
IFTPVIEDIEKALVCRAKLYIDQTDSIPKERETVRELQVYTSPKNTEISVHPSTRLHEGA
AVTMTCASEGLPAPEIFWSKKLDNGVLQLLSGNATLTLIAMRMEDSGIYVCEGVNLVGRD
KTEVELIVQEKPFTVDISPGSQVAAQVGDSVVLTCAAVGCDSPSFSWRTQTDSPLNGEVR
DEGATSTLTLSPVGVEDEHSYLCTVTCQRRKLEKTIQVEVYSFPEDPEIEISGPLVHGRP
VTVNCTVPNVYPFDHLEIELLKGETTLLNKFLREEIGTKSLETKSLEMTFIPTAEDTGKA
LVCLAKLHSSQMESEPKQRQSTQTLYVNVAPKEPTIWVSPSPVPEEGSPVNLTCSSDGFP
TPKILWSRQLKNGELQPLSQNTTLSFMATKMEDSGIYVCEGINEAGISKKSVELIIQGSS
KDIQLTVFPSKSVKEGDTVIISCTCGSVPEIWIILKKKAKTGDMVLKSVNGSYTIRKAQL
QDAGVYECESKTEVGSQLRSLTLDVKGKENNKDYFSPELLALYFASSLVIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV

Region:1-739
Length:739aa
Label:Full sequence
Reset:click