Input sequence

Protein name Vascular cell adhesion protein 1
Organism Mus musculus Length 739
Disorder content 1.2% ProS content 0.4%
IDEAL NA UniProt P29533

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP TMHMM:TMhelix 0 739 1-119 120-124 125-226 227-232 233-408 409-412 413-605 606-609 610-736 737-739 1-119 125-226 233-408 413-605 610-736 227-232 737-739 737-739 25-223 313-511 525-686 237-383 29-597 519-686 25-112 133-221 225-309 312-400 421-509 527-581 604-686 229-315 520-603 579-688 317-402 25-114 23-114 115-223 215-310 311-402 403-511 503-597 603-687 699-721 1vcaA(1-199) 3e-81 73.87% 1vcaA(1-199) 5e-63 58.29% 2xy1A(17-192) 7e-13 29.67% 2xy1A(17-174) 2e-09 29.81% 3b43A(8-568) 1e-52 19.53% 2xy1A(11-192) 7e-26 27.81% PF07679 7.9e-12 49.9% PF05790 2.2e-38 138.1% PF07686 1.3e-06 32.5% PF07679 3.3e-09 41.2% PF05790 2e-35 128.3% PF00047 2.4e-07 35.0% PF07686 0.00083 20.0% 1olzA1(2-91) 2e-10 17.78% 1olzA1(5-91) 3e-10 14.94% 1wgoA(8-120) 9e-09 12.93% 1ij9A2(5-90) 2e-08 61.63% 1ij9A2(1-90) 7e-08 74.44% b.1.1 2.7e-17 55.1% b.1.1 7.6e-23 71.7% b.1.1 2e-18 53.6% b.1.1 9.1e-15 47.1% b.1.1 2.9e-20 63.6% b.1.1 7.8e-19 54.9% b.1.1 1.5e-13 43.6%

Sequence

MPVKMVAVLGASTVLWILFAVSQAFKIEISPEYKTIAQIGDSMALTCSTTGCESPLFSWR
TQIDSPLNAKVRTEGSKSVLTMEPVSFENEHSYLCTATCGSGKLERSIHVDIYSFPKDPE
IQFSGPLEVGKPVTVKCLAPDIYPVYRLEIDLFKGDQLMNRQEFSSEEMTKSLETKSLEV
TFTPVIEDIGKALVCRAKLHIDQIDSTLKERETVKELQVYISPRNTTISVHPSTRLQEGG
AVTMTCSSEGLPAPEIFWGRKLDNEVLQLLSGNATLTLIAMRMEDSGVYVCEGVNLIGRD
KAEVELVVQEKPFIVDISPGSQVAAQVGDSVVLTCAAIGCDSPSFSWRTQTDSPLNGVVR
NEGAKSTLVLSSVGFEDEHSYLCAVTCLQRTLEKRTQVEVYSFPEDPVIKMSGPLVHGRP
VTVNCTVPNVYPFDHLEIELLKGETTLMKKYFLEEMGIKSLETKILETTFIPTIEDTGKS
LVCLARLHSGEMESEPKQRQSVQPLYVNVAPKETTIWVSPSPILEEGSPVNLTCSSDGIP
APKILWSRQLNNGELQPLSENTTLTFMSTKRDDSGIYVCEGINEAGISRKSVELIIQVSP
KDIQLTVFPSKSVKEGDTVIISCTCGNVPETWIILKKKAKTGDMVLKSVDGSYTIRQAQL
QDAGIYECESKTEVGSQLRSLTLDVKGKEHNKDYFSPELLALYCASSLVIPAIGMIVYFA
RKANMKGSYSLVEAQKSKV

Region:1-739
Length:739aa
Label:Full sequence
Reset:click