Input sequence

Protein name Violet-sensitive opsin
Organism Gallus gallus Length 347
Disorder content 9.2% ProS content 2.6%
IDEAL NA UniProt P28684

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 347 1-5 6-320 321-347 6-320 1-5 321-347 334-338 344-347 6-340 1-342 50-301 49-301 6-342 16-343 77-91 242-255 34-56 69-91 106-128 148-170 197-219 249-271 281-303 1f88A(8-336) 2e-15 25.07% 1f88A(4-338) 3e-46 22.9% PF00001(1-253) 2e-19 28.68% PF00001 1.3e-67 235.2% 1f88A(8-338) 3e-26 42.65% f.13.1 1.1e-77 259.0%

Sequence

MSSDDDFYLFTNGSVPGPWDGPQYHIAPPWAFYLQTAFMGIVFAVGTPLNAVVLWVTVRY
KRLRQPLNYILVNISASGFVSCVLSVFVVFVASARGYFVFGKRVCELEAFVGTHGGLVTG
WSLAFLAFERYIVICKPFGNFRFSSRHALLVVVATWLIGVGVGLPPFFGWSRYMPEGLQC
SCGPDWYTVGTKYRSEYYTWFLFIFCFIVPLSLIIFSYSQLLSALRAVAAQQQESATTQK
AEREVSRMVVVMVGSFCLCYVPYAALAMYMVNNRDHGLDLRLVTIPAFFSKSACVYNPII
YCFMNKQFRACIMETVCGKPLTDDSDASTSAQRTEVSSVSSSQVGPT

Region:1-347
Length:347aa
Label:Full sequence
Reset:click