Input sequence

Protein name Collagen alpha-1(II) chain
Organism Mus musculus Length 1487
Disorder content 81.2% ProS content 79.0%
IDEAL NA UniProt P28481

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1487 1-28 29-72 73-1251 1252-1487 29-72 1252-1487 1-28 73-1251 1-28 73-102 107-179 202-1224 1231-1251 1272-1487 29-96 527-615 1272-1487 29-96 1269-1486 34-88 34-88 116-175 199-257 258-317 318-377 378-437 438-497 498-557 558-617 618-677 678-737 738-797 801-860 861-920 921-980 981-1040 1041-1100 1101-1160 1161-1220 1269-1486 1230-1430 32-96 1279-1319 10-21 108-134 152-173 191-261 309-325 330-382 395-411 416-451 471-513 579-600 621-633 636-655 659-687 696-753 783-804 815-852 854-885 888-930 948-981 1017-1032 1038-1053 1062-1081 1137-1217 1338-1345 4ae2A(1-212) 2e-92 69.44% 1u5mA(5-73) 4e-31 84.06% 2pneA(2-79) 0.0005 38.2% 4ae2A(1-212) 3e-60 69.44% 1u5mA(5-73) 2e-20 84.06% PF01410(1-209) 3e-85 72.02% PF00093(1-55) 4e-06 41.82% PF00093 4e-25 94.1% PF01391 4.4e-12 50.7% PF01391 3e-11 48.0% PF01391 4.3e-18 70.7% PF01391 2.1e-14 58.5% PF01391 1.3e-12 52.5% PF01391 3.6e-15 61.0% PF01391 7.5e-12 50.0% PF01391 2.8e-15 61.4% PF01391 4.9e-16 63.9% PF01391 6.9e-13 53.4% PF01391 1.6e-16 65.5% PF01391 1.6e-16 65.5% PF01391 7.7e-14 56.6% PF01391 3.3e-11 47.9% PF01391 5.6e-13 53.7% PF01391 4.2e-13 54.1% PF01391 1.8e-16 65.3% PF01391 1e-07 36.2% PF01410 2.5e-169 573.1% 1j83A(7-179) 1e-41 8.29% 1u5mA(8-73) 2e-14 83.33% d.171.1 0.0003 11.9%

Sequence

MIRLGAPQSLVLLTLLIAAVLRCQGQDAQEAGSCLQNGQRYKDKDVWKPSSCRICVCDTG
NVLCDDIICEDPDCLNPEIPFGECCPICPADLATASGKLGPKGQKGEPGDIRDIIGPRGP
PGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPAGPPGPPGPPGLSAGNFA
AQMAGGYDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPAGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLTG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGANGNPGPAGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPSGPAGARGIAGPQGPRGDKGESGEQGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPVG
PPGSPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPMQYMRADEADSTLRQHDVEVDATLK
SLNNQIESIRSPDGSRKNPARTCQDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPATVPRKNWWSSKSKEKKHIWFGETMNGGFHFSYGDGNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEMRAEGNSRFTYTALKDGCTK
HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGAEQEFGVDIGPVCFL

Region:1-1487
Length:1487aa
Label:Full sequence
Reset:click